U.S. flag

An official website of the United States government

Links from Nucleotide

    • Showing Current items.

    NF-YC6 nuclear factor Y, subunit C6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835116, updated on 18-Sep-2024

    Summary

    Official Symbol
    NF-YC6
    Official Full Name
    nuclear factor Y, subunit C6
    Primary source
    TAIR:AT5G50480
    Locus tag
    AT5G50480
    See related
    Araport:AT5G50480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''nuclear factor Y; MBA10.3; MBA10_3; nuclear factor Y; subunit C6; subunit C6''
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See NF-YC6 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (20557574..20558487, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene nuclear factor Y, subunit C7 Neighboring gene nuclear factor Y, subunit C5 Neighboring gene uncharacterized protein

    Interactions

    General gene information

    NM_124430.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus  

    General protein information

    Preferred Names
    nuclear factor Y, subunit C6
    NP_199859.1
    • ''nuclear factor Y, subunit C6'' (NF-YC6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C7 (TAIR:AT5G50470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20557574..20558487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124430.3 → NP_199859.1  nuclear factor Y, subunit C6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199859.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FGP7
      UniProtKB/TrEMBL
      A0A178UER5, A0A384KFQ7, A0A7G2FI92, C0SVT2
      Conserved Domains (1) summary
      COG5208
      Location:39 → 133
      HAP5; CCAAT-binding factor, subunit C [Transcription]
    External link. Please review our privacy policy.