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    AP4E1 adaptor related protein complex 4 subunit epsilon 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693444, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AP4E1provided by VGNC
    Official Full Name
    adaptor related protein complex 4 subunit epsilon 1provided by VGNC
    Primary source
    VGNC:VGNC:69973
    See related
    Ensembl:ENSMMUG00000015159
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AP4E1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (27303475..27394111)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (27244558..27389756)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily M member 7 Neighboring gene signal peptide peptidase like 2A Neighboring gene uncharacterized LOC106999181 Neighboring gene DDB1- and CUL4-associated factor 13 pseudogene Neighboring gene TNF alpha induced protein 8 like 3 Neighboring gene uncharacterized LOC114679401 Neighboring gene uncharacterized LOC114679402

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cargo adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-4 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-4 complex subunit epsilon-1
    Names
    adaptor related protein complex 4 epsilon 1 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      27303475..27394111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850918.1 → XP_028706751.1  AP-4 complex subunit epsilon-1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ANW5, F6UD43
      Conserved Domains (2) summary
      pfam01602
      Location:52 → 596
      Adaptin_N; Adaptin N terminal region
      pfam14807
      Location:1033 → 1132
      AP4E_app_platf; Adaptin AP4 complex epsilon appendage platform

    2. XM_028850920.1 → XP_028706753.1  AP-4 complex subunit epsilon-1 isoform X3

      Conserved Domains (1) summary
      pfam01602
      Location:52 → 596
      Adaptin_N; Adaptin N terminal region

    3. XM_015142239.2 → XP_014997725.2  AP-4 complex subunit epsilon-1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ANW5, F6UD43
      Related
      ENSMMUP00000019879.4, ENSMMUT00000021258.4
      Conserved Domains (2) summary
      pfam01602
      Location:52 → 596
      Adaptin_N; Adaptin N terminal region
      pfam14807
      Location:1033 → 1132
      AP4E_app_platf; Adaptin AP4 complex epsilon appendage platform

    4. XM_028850919.1 → XP_028706752.1  AP-4 complex subunit epsilon-1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8ANW5
      Conserved Domains (2) summary
      pfam01602
      Location:1 → 445
      Adaptin_N; Adaptin N terminal region
      pfam14807
      Location:882 → 981
      AP4E_app_platf; Adaptin AP4 complex epsilon appendage platform

    RNA

    1. XR_003731238.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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