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    CDH17 cadherin 17 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698886, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CDH17provided by VGNC
    Official Full Name
    cadherin 17provided by VGNC
    Primary source
    VGNC:VGNC:70810
    See related
    Ensembl:ENSMMUG00000020010
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CDH17 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (94449243..94514025, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (92666670..92754984, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene uncharacterized LOC106999860 Neighboring gene GTP binding protein overexpressed in skeletal muscle Neighboring gene 40S ribosomal protein S4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adherens junction organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cadherin-17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      94449243..94514025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852777.1 → XP_028708610.1  cadherin-17 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R2B4, G7MZS1
      Related
      ENSMMUP00000054448.1, ENSMMUT00000074040.2
      Conserved Domains (2) summary
      cd11304
      Location:570 → 663
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00112
      Location:271 → 338
      CA; Cadherin repeats

    2. XM_028852776.1 → XP_028708609.1  cadherin-17 isoform X1

      UniProtKB/TrEMBL
      G7MZS1
      Conserved Domains (2) summary
      cd11304
      Location:578 → 671
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00112
      Location:279 → 346
      CA; Cadherin repeats
    Nucleotide Protein
    Heading Accession and Version

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