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    GTP binding Elongation factor Tu family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837307, updated on 18-Sep-2024

    Summary

    Official Full Name
    GTP binding Elongation factor Tu family protein
    Primary source
    TAIR:AT1G07920
    Locus tag
    AT1G07920
    See related
    Araport:AT1G07920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6D22.2; T6D22_2
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (2454771..2457321)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene RNAligase Neighboring gene pseudo Neighboring gene GTP binding Elongation factor Tu family protein Neighboring gene GTP binding Elongation factor Tu family protein Neighboring gene pseudo

    Interactions

    General gene information

    NM_100666.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity  
    enables mRNA binding PubMed 

    General protein information

    Preferred Names
    GTP binding Elongation factor Tu family protein
    NP_563799.1
    • GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, nucleolus, plasma membrane, chloroplast, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3); Has 84282 Blast hits to 84186 proteins in 18729 species: Archae - 1011; Bacteria - 33710; Metazoa - 21823; Fungi - 13003; Plants - 1919; Viruses - 6; Other Eukaryotes - 12810 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2454771..2457321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100666.4 → NP_563799.1  GTP binding Elongation factor Tu family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563799.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MSE8, B9DGN1, P0DH99, P13905, Q0WL56, Q0WSD5, Q39093, Q8GTY0, Q8VZE8, Q8W4H7, Q94AD0, Q9ASU9, Q9C5L4, Q9LN13
      UniProtKB/TrEMBL
      A0A178WJC9, A0A5S9T7A6, A0A5S9YFS8
      Conserved Domains (1) summary
      PTZ00141
      Location:1 → 446
      PTZ00141; elongation factor 1- alpha; Provisional
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