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    Tryptophan RNA-binding attenuator protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834789, updated on 18-Sep-2024

    Summary

    Official Full Name
    Tryptophan RNA-binding attenuator protein-like protein
    Primary source
    TAIR:AT5G47420
    Locus tag
    AT5G47420
    See related
    Araport:AT5G47420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQL5.28; MQL5_28
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (19232784..19235066)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene myb-like transcription factor family protein Neighboring gene sphingomyelin phosphodiesterase Neighboring gene DWNN domain, a CCHC-type zinc finger Neighboring gene formyltetrahydrofolate deformylase Neighboring gene auxin canalization protein (DUF828)

    Interactions

    General gene information

    NM_124113.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    part_of Hrd1p ubiquitin ligase complex PubMed 
    located_in chloroplast  
    located_in endoplasmic reticulum PubMed 
    located_in endoplasmic reticulum PubMed 

    General protein information

    Preferred Names
    Tryptophan RNA-binding attenuator protein-like protein
    NP_199553.2
    • Tryptophan RNA-binding attenuator protein-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF124 (InterPro:IPR002838), Tryptophan RNA-binding attenuator protein-like (InterPro:IPR016031); BEST Arabidopsis thaliana protein match is: Tryptophan RNA-binding attenuator protein-like (TAIR:AT4G17420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19232784..19235066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124113.5NP_199553.2  Tryptophan RNA-binding attenuator protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199553.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJL8, A0A5S9YBU3, A0A654G8T9, Q8RXM5
      Conserved Domains (1) summary
      pfam01987
      Location:25234
      AIM24; Mitochondrial biogenesis AIM24
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