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    CG4393 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42764, updated on 17-Dec-2024

    Summary

    Official Symbol
    CG4393provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039075
    Locus tag
    Dmel_CG4393
    See related
    AllianceGenome:FB:FBgn0039075
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    ANKS1A; Dmel\CG4393
    Summary
    Predicted to be active in cytosol. Is expressed in spermatozoon. Orthologous to several human genes including ANKS1A (ankyrin repeat and sterile alpha motif domain containing 1A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CG4393 in Genome Data Viewer
    Location:
    94F1-94F1; 3-79 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23375928..23384777, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19201650..19210499, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43387

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in cytosol  

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG4393-PB
    CG4393-PC
    CG4393-PD

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23375928..23384777 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300555.1 → NP_001287484.1  uncharacterized protein Dmel_CG4393, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287484.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1EC88, Q9VCM6
      Conserved Domains (7) summary
      cd09500
      Location:1005 → 1069
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      smart00454
      Location:1009 → 1075
      SAM; Sterile alpha motif
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1161 → 1305
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:224 → 276
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:49 → 79
      ANK; ANK repeat [structural motif]
    2. NM_142886.2 → NP_651143.2  uncharacterized protein Dmel_CG4393, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651143.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1EC88, Q9VCM6
      Conserved Domains (7) summary
      cd09500
      Location:1005 → 1069
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      smart00454
      Location:1009 → 1075
      SAM; Sterile alpha motif
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1161 → 1305
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:224 → 276
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:49 → 79
      ANK; ANK repeat [structural motif]
    3. NM_001300554.1 → NP_001287483.1  uncharacterized protein Dmel_CG4393, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287483.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1EC88, Q9VCM6
      Conserved Domains (7) summary
      cd09500
      Location:1005 → 1069
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      smart00454
      Location:1009 → 1075
      SAM; Sterile alpha motif
      cd00204
      Location:43 → 171
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1161 → 1305
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:53 → 148
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:224 → 276
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:49 → 79
      ANK; ANK repeat [structural motif]
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