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    Mannose-binding lectin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838560, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mannose-binding lectin superfamily protein
    Primary source
    TAIR:AT1G19715
    Locus tag
    AT1G19715
    See related
    Araport:AT1G19715
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (6816702..6819542, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene BEL1-like homeodomain 10 Neighboring gene ncRNA Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene Thioredoxin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001123843.1
    NM_001198112.1
    NM_179360.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mannose-binding lectin superfamily protein
    NP_001117315.1
    • Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001185041.1
    • Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1).
    NP_849691.1
    • Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1); Has 3242 Blast hits to 933 proteins in 57 species: Archae - 0; Bacteria - 14; Metazoa - 135; Fungi - 2; Plants - 3082; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6816702..6819542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179360.1 → NP_849691.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849691.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPP7
      Conserved Domains (1) summary
      cd09612
      Location:18 → 146
      Jacalin; Jacalin-like plant lectin domain

    2. NM_001123843.1 → NP_001117315.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117315.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPP7
      Conserved Domains (1) summary
      cd09612
      Location:224 → 350
      Jacalin; Jacalin-like plant lectin domain

    3. NM_001198112.1 → NP_001185041.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185041.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HQX1, Q8W4L1, Q9FXH0
      UniProtKB/TrEMBL
      A0A5S9V8I5
      Conserved Domains (1) summary
      cd09612
      Location:24 → 152
      Jacalin; Jacalin-like plant lectin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HQX1.1

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