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    Atac1 Ada2a-containing complex component 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33977, updated on 9-Dec-2024

    Summary

    Official Symbol
    Atac1provided by FlyBase
    Official Full Name
    Ada2a-containing complex component 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0031876
    Locus tag
    Dmel_CG9200
    See related
    AllianceGenome:FB:FBgn0031876
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9200; dAtac1; dATAC1; Dmel\CG9200
    Summary
    Involved in chromatin remodeling. Part of ATAC complex. Orthologous to human ZZZ3 (zinc finger ZZ-type containing 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Atac1 in Genome Data Viewer
    Location:
    27C7-27C7; 2-23 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (6959099..6960328, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (6959099..6960328, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Gas41 Neighboring gene Stromalin 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 3-Hydroxymethyl-3-methylglutaryl-CoA lyase Neighboring gene septin interacting protein 2 Neighboring gene Coproporphyrinogen oxidase

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of ATAC complex PubMed 

    General protein information

    Preferred Names
    Ada2a-containing complex component 1
    Names
    ATAC component 1
    Atac1-PA
    CG9200-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      6959099..6960328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135244.4 → NP_609088.1  Ada2a-containing complex component 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609088.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VM59
      Related
      FBpp0078990
      Conserved Domains (2) summary
      smart00717
      Location:135 → 185
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd00167
      Location:135 → 183
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
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