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    bdl borderless [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33635, updated on 9-Dec-2024

    Summary

    Official Symbol
    bdlprovided by FlyBase
    Official Full Name
    borderlessprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028482
    Locus tag
    Dmel_CG16857
    See related
    AllianceGenome:FB:FBgn0028482
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH11322; CG16857; CT35491; Dmel\CG16857; GH11322
    Summary
    Enables cell-cell adhesion mediator activity. Involved in several processes, including homophilic cell adhesion via plasma membrane adhesion molecules; nervous system development; and neuron cell-cell adhesion. Located in plasma membrane. Is expressed in several structures, including adult head; adult optic lobe; glial cell; medulla layer; and synaptic neuropil domain. Orthologous to human IGSF9 (immunoglobulin superfamily member 9). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See bdl in Genome Data Viewer
    Location:
    24E1-24E1; 2-12 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4324554..4331830)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4324554..4331830)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Arginine methyltransferase 2 Neighboring gene turtle Neighboring gene ABC transporter expressed in trachea Neighboring gene long non-coding RNA:CR44697 Neighboring gene mir-1005 stem loop

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in axon  
    is_active_in plasma membrane  
    located_in plasma membrane PubMed 

    General protein information

    Preferred Names
    borderless
    Names
    CG16857-PA
    bdl-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      4324554..4331830
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134978.3 → NP_608822.1  borderless [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608822.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0PTX2, Q95U86, Q9U4G1, Q9VQY3
      Related
      FBpp0077115
      Conserved Domains (6) summary
      smart00408
      Location:356 → 419
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:260 → 327
      IG_like; Immunoglobulin like
      cd00063
      Location:435 → 524
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:153 → 242
      I-set; Immunoglobulin I-set domain
      pfam13895
      Location:252 → 337
      Ig_2; Immunoglobulin domain
      cl11960
      Location:157 → 242
      Ig; Immunoglobulin domain
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