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    RHS16 root hair specific 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829039, updated on 18-Sep-2024

    Summary

    Official Symbol
    RHS16
    Official Full Name
    root hair specific 16
    Primary source
    TAIR:AT4G29180
    Locus tag
    AT4G29180
    See related
    Araport:AT4G29180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19B15.210; F19B15_210; root hair specific 16
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    Genomic context

    See RHS16 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (14385471..14389775)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SNF7 family protein Neighboring gene Mnd1 family protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene Beta-galactosidase related protein

    Interactions

    General gene information

    NM_119062.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity  
    enables protein binding PubMed 
    enables protein serine/threonine kinase activity  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation  
    Component Evidence Code Pubs
    located_in extracellular region  

    General protein information

    Preferred Names
    root hair specific 16
    NP_001190865.1
    • root hair specific 16 (RHS16); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G29450.1).
    NP_194647.2
    • root hair specific 16 (RHS16); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G29450.1); Has 136747 Blast hits to 120807 proteins in 4421 species: Archae - 131; Bacteria - 13766; Metazoa - 43367; Fungi - 9914; Plants - 51055; Viruses - 402; Other Eukaryotes - 18112 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14385471..14389775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203936.2 → NP_001190865.1  root hair specific 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190865.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0LGR6, Q9SZE6
      UniProtKB/TrEMBL
      A0A178V2M3, A0A5S9XXM9
      Conserved Domains (3) summary
      PLN00113
      Location:400 → 478
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14066
      Location:573 → 852
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam12819
      Location:31 → 358
      Malectin_like; Carbohydrate-binding protein of the ER
    2. NM_001341960.1 → NP_001328257.1  root hair specific 16 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4I7, A0A1P8B426, A0A384LFC7, A0A5S9XXM9
    3. NM_119062.3 → NP_194647.2  root hair specific 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194647.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XXM9, F4JMW3
      Conserved Domains (2) summary
      cd14066
      Location:571 → 850
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam12819
      Location:31 → 358
      Malectin_like; Carbohydrate-binding protein of the ER
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