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    CROCC ciliary rootlet coiled-coil, rootletin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710793, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CROCCprovided by VGNC
    Official Full Name
    ciliary rootlet coiled-coil, rootletinprovided by VGNC
    Primary source
    VGNC:VGNC:97756
    See related
    Ensembl:ENSMMUG00000007315
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CROCC in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (207793097..207852155, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (15606856..15667928)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene ATPase cation transporting 13A2 Neighboring gene microfibril associated protein 2 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC114674004

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in centrosome cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rootletin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      207793097..207852155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839039.1 → XP_028694872.1  rootletin isoform X5

      Conserved Domains (4) summary
      COG1196
      Location:378 → 1194
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG4372
      Location:1540 → 1778
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
      TIGR02168
      Location:116 → 477
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15035
      Location:1 → 96
      Rootletin; Ciliary rootlet component, centrosome cohesion

    2. XM_028839034.1 → XP_028694867.1  rootletin isoform X2

      Related
      ENSMMUP00000009591.4, ENSMMUT00000010223.4
      Conserved Domains (4) summary
      COG1196
      Location:543 → 1359
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG4372
      Location:1705 → 1943
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
      pfam12128
      Location:20 → 696
      DUF3584; Protein of unknown function (DUF3584)
      pfam15035
      Location:84 → 261
      Rootletin; Ciliary rootlet component, centrosome cohesion

    3. XM_028839042.1 → XP_028694875.1  rootletin isoform X5

      Conserved Domains (4) summary
      COG1196
      Location:378 → 1194
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG4372
      Location:1540 → 1778
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
      TIGR02168
      Location:116 → 477
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15035
      Location:1 → 96
      Rootletin; Ciliary rootlet component, centrosome cohesion

    4. XM_028839030.1 → XP_028694863.1  rootletin isoform X1

      Conserved Domains (4) summary
      COG1196
      Location:615 → 1431
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG4372
      Location:1777 → 2015
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
      pfam12128
      Location:92 → 768
      DUF3584; Protein of unknown function (DUF3584)
      pfam15035
      Location:156 → 333
      Rootletin; Ciliary rootlet component, centrosome cohesion

    5. XM_015123482.2 → XP_014978968.2  rootletin isoform X4

      Conserved Domains (4) summary
      COG1196
      Location:615 → 1431
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1768 → 2000
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam12128
      Location:92 → 768
      DUF3584; Protein of unknown function (DUF3584)
      pfam15035
      Location:156 → 333
      Rootletin; Ciliary rootlet component, centrosome cohesion

    6. XM_015123446.2 → XP_014978932.2  rootletin isoform X3

      UniProtKB/TrEMBL
      F7FP41
      Related
      ENSMMUP00000040569.3, ENSMMUT00000047537.3
      Conserved Domains (4) summary
      COG1196
      Location:615 → 1431
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG4372
      Location:1777 → 1998
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
      pfam12128
      Location:92 → 768
      DUF3584; Protein of unknown function (DUF3584)
      pfam15035
      Location:156 → 333
      Rootletin; Ciliary rootlet component, centrosome cohesion
    Nucleotide Protein
    Heading Accession and Version

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