Similar studies for GEO DataSets (Select 200165741) - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Links from GEO DataSets

Items: 20

Select item 2001657411.

Single cell atlas of epithelial and stromal cell heterogeneity by lobe and strain in the mouse prostate

(Submitter supplied) Evaluating the complex interplay of cell types in the tissue microenvironment is critical to understanding the origin and progression of diseases in the prostate and potential opportunities for intervention. Mouse models are an essential tool to investigate the molecular and cell-type-specific contributions of prostate disease at an organismal level. While there are well-documented differences in the extent, timing, and nature of disease development in various genetically engineered and exposure-based mouse models in different mouse strains and prostate lobes within each mouse strain, the underlying molecular phenotypic differences in cell types across mouse strains and prostate lobes are incompletely understood.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21273
20 Samples

Download data: MTX, TSV

Series

Accession:: GSE165741

ID:: 200165741

PubMed Similar studies SRA Run Selector

Select item 2001730962.

Single-cell RNA-sequencing of adult mouse lower urinary tracts v2

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL19057 GPL24247
7 Samples

Download data: H5

Series

Accession:: GSE173096

ID:: 200173096

PubMed Full text in PMC Similar studies

Select item 2001725153.

Single-cell RNA-sequencing of adult mouse urethra v2

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse urethra on the 10x Genomics platform.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24247 GPL19057
3 Samples

Download data: H5

Series

Accession:: GSE172515

ID:: 200172515

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001723574.

Single-cell RNA-sequencing of adult human normal and BPH (glandular and stroma) prostates and urethra

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24676 GPL18573
19 Samples

Download data: H5

Series

Accession:: GSE172357

ID:: 200172357

PubMed Full text in PMC Similar studies

Select item 2001723525.

Single-cell RNA-sequencing of adult mouse prostates v2

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse prostates on the 10x Genomics platform.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
4 Samples

Download data: H5

Series

Accession:: GSE172352

ID:: 200172352

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001723476.

Bulk RNA-sequencing of fibroblasts isolated by FACS from normal human prostate

(Submitter supplied) Differential expression of prostatic fibroblasts were determined using RNA-sequencing of FACS sorted fibroblasts from normal human prostate transition and peripheral.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24676
9 Samples

Download data: TXT

Series

Accession:: GSE172347

ID:: 200172347

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001723167.

Single-cell RNA-sequencing of adult human prostates from organ donors v2

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates FACS sorted for viability from organ donors (with no known prostatic diseases) on the 10x Genomics platform.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
6 Samples

Download data: H5

Series

Accession:: GSE172316

ID:: 200172316

PubMed Full text in PMC Similar studies

Select item 2001723018.

Single-cell RNA-sequencing of adult human prostates from BPH patients (glandular and stromal phenothpes)

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates from BPH patients on the 10x Genomics platform.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24676 GPL18573
13 Samples

Download data: H5

Series

Accession:: GSE172301

ID:: 200172301

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001459299.

Single-cell RNA-sequencing of adult mouse lower urinary tracts

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
6 Samples

Download data: H5

Series

Accession:: GSE145929

ID:: 200145929

PubMed Full text in PMC Similar studies

Select item 20014592810.

Single-cell RNA-sequencing of adult human prostates and urethra (normal and diseased)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
9 Samples

Download data: H5

Series

Accession:: GSE145928

ID:: 200145928

PubMed Full text in PMC Similar studies

Select item 20014586511.

Single-cell RNA-sequencing of adult mouse urethra

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse urethra on the 10x Genomics platform.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
2 Samples

Download data: H5

Series

Accession:: GSE145865

ID:: 200145865

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20014586112.

Single-cell RNA-sequencing of adult mouse prostates

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse prostates on the 10x Genomics platform.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
4 Samples

Download data: H5

Series

Accession:: GSE145861

ID:: 200145861

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20014584313.

Single-cell RNA-sequencing of adult human prostates from organ donors

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
6 Samples

Download data: H5

Series

Accession:: GSE145843

ID:: 200145843

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20014583814.

Single-cell RNA-sequencing of adult human prostates from BPH patients

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates FACS sorted for viability from BPH patients on the 10x Genomics platform.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
3 Samples

Download data: H5

Series

Accession:: GSE145838

ID:: 200145838

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20015069215.

Single-cell RNA-seq analysis of mouse and human prostate

(Submitter supplied) Single-cell RNA-seq analysis of wild-type mouse and benign human prostate

Organism:: Mus musculus; Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL24247 GPL24676
9 Samples

Download data: TXT

Series

Accession:: GSE150692

ID:: 200150692

PubMed Full text in PMC Similar studies

Select item 20016539316.

Comparative transcriptome analysis of metastatic heterogeneity in a mouse model of breast cancer

(Submitter supplied) We aimed to understand the transcriptome patterns of organ-derived cancer cell isolates from MMTV-PyMT mice. Tissues from primary tumors and organs harboring distal metastases were harvested from cancer bearing female mice. Although metastatic progression from primary tumors to lung tissue is well studied in the MMTV-PyMT model, metastases to other distal organs and the significance of intratumor heterogeneity across metastases from distal organs remain unclear. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
17 Samples

Download data: CSV

Series

Accession:: GSE165393

ID:: 200165393

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20014460217.

RNA-seq analysis of FACS-isolated distinct cell lineages in adult mouse prostates

(Submitter supplied) To further characterize the molecular and biological features of the Sca-1+ luminal cells, we performed an RNA-seq analysis using FACS-isolated distinct cell lineages in adult mouse prostates, including the Lin-CD24lowCD49fhigh basal cells, Lin-CD24-CD49f- stromal cells, Lin-CD24highCD49flowSca-1- luminal cells, and Lin-CD24highCD49flowSca-1+ luminal cells.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL9185
10 Samples

Download data: TXT

Series

Accession:: GSE144602

ID:: 200144602

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20019901518.

scRNA-Seq analysis of Trim28-deleted NPp53 mouse prostate tissue

(Submitter supplied) The Tripartite motif-containing 28 (TRIM28) transcription factor is upregulated in high-grade prostate cancers and was recently proposed as a therapeutic target for castration-resistant prostate cancers. To study the role of TRIM28 in prostate cancer progression in vivo, we used a genetically engineered mouse model, combining prostate-specific Trim28 inactivation with inactivation of Trp53 and Pten. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
2 Samples

Download data: H5

Series

Accession:: GSE199015

ID:: 200199015

PubMed Full text in PMC Similar studies

Select item 20015568319.

A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cell

(Submitter supplied) To study the development and composition of human ocular surface, we performed single cell (sc) RNA-Seq at key embryonic, fetal and adult stages and generated the first atlas of the corneal and conjunctival cell types from development to adulthood. The conjunctival epithelium is the first to be specified in the epithelial layer , followed by the corneal epithelium and the establishment of proliferative epithelial progenitors, which predate the formation of limbal niche by a few weeks. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL24676
32 Samples

Download data: CSV, TXT

Series

Accession:: GSE155683

ID:: 200155683

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20017866720.

Exploratory Single Cell RNA Sequencing: Murine Ciliary Body Transcriptome

(Submitter supplied) Single cell RNA-seq was performed on dissected murine ciliary body samples, and the resulted sequencing data was used to assess the various cell types present within the dissected tissue