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Series GSE172316 Query DataSets for GSE172316
Status Public on Jul 07, 2021
Title Single-cell RNA-sequencing of adult human prostates from organ donors v2
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Single-cell RNA-sequencing was conducted on heterogeneous human prostates FACS sorted for viability from organ donors (with no known prostatic diseases) on the 10x Genomics platform.
 
Overall design Fresh human prostate specimens were digested into single-cell suspensions, cells were subject to single-cell RNA-sequencing using the 10x Genomics platform.

Raw data files previously uploaded under GSE145843.
 
Contributor(s) Strand DW, Henry GH
Citation(s) 34173975
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 DK115477 Notch-mediated 5ARI resistance in human BPH UT SOUTHWESTERN MEDICAL CENTER Douglas William Strand
U54 DK104310 Cellular and molecular mediators of fibrosis in the development of urinary tract dysfunction UNIVERSITY OF WISCONSIN MADISON WILLIAM A RICKE
U01 DK110807 Molecular and fate maps of prostatic stroma UNIVERSITY OF WISCONSIN MADISON CHAD M. VEZINA
R01 DK099328 Role of DNA methylation in prostate glandular development and urinary function UNIVERSITY OF WISCONSIN MADISON CHAD M. VEZINA
Submission date Apr 19, 2021
Last update date Jul 09, 2021
Contact name Gervaise H. Henry
E-mail(s) [email protected]
Phone 2146480497
Organization name UT Southwestern Medical Center
Department Urology
Lab Strand Lab
Street address 5323 Harry Hines Blvd, Mail Code:9110
City Dallas
State/province Texas
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM5252457 D17PrPzF_Via (3)
GSM5252458 D17PrTzF_Via (3)
GSM5252459 D27PrPzF_Via (3)
This SubSeries is part of SuperSeries:
GSE172357 Single-cell RNA-sequencing of adult human normal and BPH (glandular and stroma) prostates and urethra
Relations
BioProject PRJNA722940

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172316_RAW.tar 108.8 Mb (http)(custom) TAR (of H5)
Raw data are available in SRA
Processed data provided as supplementary file

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