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Links from GEO DataSets

Items: 15

1.

Diagnosis of childhood bacterial and viral infection using host RNA expression - Meningococcal validation cohort

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6883
45 Samples
Download data: TXT
Series
Accession:
GSE80496
ID:
200080496
2.

Diagnosis of childhood bacterial and viral infection using host RNA expression - Inflammatory validation cohort

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL10558
48 Samples
Download data: TXT
Series
Accession:
GSE80412
ID:
200080412
3.

Diagnosis of childhood bacterial and viral infection using host RNA expression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platforms:
GPL10558 GPL6883 GPL6947
531 Samples
Download data
Series
Accession:
GSE72829
ID:
200072829
4.

Diagnosis of childhood bacterial and viral infection using host RNA expression [validation set]

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6947
146 Samples
Download data: TXT
Series
Accession:
GSE72810
ID:
200072810
5.

Diagnosis of childhood bacterial and viral infection using host RNA expression [Discovery set]

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
292 Samples
Download data: TXT
Series
Accession:
GSE72809
ID:
200072809
6.

Diagnosis of Kawasaki Disease in children using host RNA expression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platforms:
GPL10558 GPL6947
839 Samples
Download data
Series
Accession:
GSE73464
ID:
200073464
7.

Diagnosis of Kawasaki Disease in children using host RNA expression [Validation_HT12V4_Dataset]

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with inflammatory diseases, bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
233 Samples
Download data: TXT
Series
Accession:
GSE73463
ID:
200073463
8.

Diagnosis of Kawasaki Disease in children using host RNA expression [Validation_HT12V3_Dataset]

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with inflammatory diseases, bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6947
147 Samples
Download data: TXT
Series
Accession:
GSE73462
ID:
200073462
9.

Diagnosis of Kawasaki Disease in children using host RNA expression [Discovery_Dataset]

(Submitter supplied) Genome-wide analysis of transcriptional profiles in children <17 years of age with inflammatory diseases, bacterial or viral infections or with clinical features suggestive of infection.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
459 Samples
Download data: TXT
Series
Accession:
GSE73461
ID:
200073461
10.

Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections

(Submitter supplied) The use of microbiological cultures for diagnosing bacterial infections in young febrile infants have substantial limitations, including false positive and false negative cultures, and non-ideal turn-around times. Analysis of host genomic expression patterns (“RNA biosignatures”) in response to the presence of specific pathogens, however, may provide an alternate and potentially improved diagnostic approach. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
298 Samples
Download data: TXT
Series
Accession:
GSE64456
ID:
200064456
11.

Gene expression profiles in children under treatment for a malignancy presenting with neutropenic fever

(Submitter supplied) By studying differently expressed immune genes with gene expression profiling in immune competent children researchers have been able to distinguish between children with asymptomatic viral infection and those with symptomatic viral infection as well as patients with bacterial infection. In this study we asked if gene expression profiling is feasible as a diagnostic tool in febrile neutropenia. We included children under treatment for a malignancy presenting with febrile neutropenia. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21697
43 Samples
Download data: TXT
12.

Host-response Transcriptional Biomarkers Accurately Discriminate Bacterial and Viral Infections by Global Pathogens

(Submitter supplied) Global endemic infections, such as leptospirosis, rickettsial diseases, and dengue infections present diagnostic challenges, posing a dilemma for antibiotic stewardship worldwide. The goal of this project was to identify accurate transcriptional classifiers able to discriminate between bacterial and viral illness of global pathogens.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL24676 GPL16791
291 Samples
Download data: TXT
Series
Accession:
GSE211567
ID:
200211567
13.

Genome wide transcriptional profiling of HIV positive and negative children with active tuberculosis, latent TB infection and other diseases

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
491 Samples
Download data
Series
Accession:
GSE39941
ID:
200039941
14.

Genome wide transcriptional profiling of HIV positive and negative children with active tuberculosis, latent TB infection and other diseases from South Africa and Malawi

(Submitter supplied) The study aimed to define transcriptional signatures for detection of active TB (TB) compared to latent TB infection (LTBI) as well as to other diseases (OD) with similar clinical phenotypes in patients with and without HIV in two African paediatric populations. Transcriptional signatures were identified that distinguished active TB from LTBI, and active TB from other diseases.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
334 Samples
Download data: TXT
Series
Accession:
GSE39940
ID:
200039940
15.

Genome wide transcriptional profiling of HIV positive and negative children with active tuberculosis, latent TB infection and other diseases from Kenya

(Submitter supplied) The study aimed to define transcriptional signatures for detection of active TB (TB) compared to latent TB infection (LTBI) as well as to other diseases (OD) with similar clinical phenotypes in patients with and without HIV in a paediatric cohort from Kenya Transcriptional signatures were identified that distinguished active TB from LTBI, active TB from other diseases, and active TB from both LTBI and other diseases in HIV+/- patients.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
157 Samples
Download data: TXT
Series
Accession:
GSE39939
ID:
200039939
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