GPL3648[Accession] - GEO DataSets - NCBI

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Select item 2000120091.

Transcript profiling in Actinobacillus pleuropneumoniae after adherence to, or planktonic growth over, SJPL cells.

(Submitter supplied) Host-pathogen interactions are of great importance in understanding the pathogenesis of infectious microorganisms. We developed in vitro models to study porcine respiratory tract pathogens using an immortalized epithelial cell line, the St. Jude Porcine Lung (SJPL) cell line. In conditions where cytotoxicity was absent or low, the transcriptomic profile of A. pleuropneumoniae after contact with the porcine lung epithelial cells was determined using DNA microarrays. more...

Organism:: Actinobacillus pleuropneumoniae

Type:: Expression profiling by array

Platform:: GPL3648
8 Samples

Download data: MEV

Series

Accession:: GSE12009

ID:: 200012009

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000063662.

Complementation

(Submitter supplied) To better understand effects of iron starvation on A. pleuropneumoniae and to identify new potential vaccine targets, we conducted transcript profiling using a DNA microarray containing all 2025 ORFs of the genome of A. pleuropneumoniae serotype 5b strain L20. Upon comparing growth of this pathogen in iron-sufficient versus iron-depleted medium, 210 genes were identified as being differentially expressed. more...

Organism:: Actinobacillus pleuropneumoniae

Type:: Expression profiling by array

Platform:: GPL3648
4 Samples

Download data: MEV

Series

Accession:: GSE6366

ID:: 200006366

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000046743.

Transcript profiling in A. pleuropneumoniae under iron restriction

(Submitter supplied) To better understand effects of iron starvation on A. pleuropneumoniae and to identify new potential vaccine targets, we conducted transcript profiling using a DNA microarray containing all 2025 ORFs of the genome of A. pleuropneumoniae serotype 5b strain L20. Upon comparing growth of this pathogen in iron-sufficient versus iron-depleted medium, 210 genes were identified as being differentially expressed. more...

Organism:: Actinobacillus pleuropneumoniae

Type:: Expression profiling by array

Platform:: GPL3648
9 Samples

Download data: TXT

Series

Accession:: GSE4674

ID:: 200004674

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000036484.

AppChip1 (NRC-IBS Actinobacillus pleuropneumoniae L20)

(Submitter supplied) PCR primers were designed for 2025 ORFs from a draft genomic sequence of Actinobacillus pleuropneumoniae L20 which comprised 2091 ORFs on 66 contigs. For AppChip1, all genes are spotted in duplicate on the microarray and sheared total genomic DNA from A. pleuropneumoniae L20 and porcine DNA were spotted in the top row of each subarray as controls. Protocol: Primers were synthesized at the Biotechnology Research Institute (BRI-NRC) in Montreal. more...

Organism:: Actinobacillus pleuropneumoniae

3 Series
21 Samples

Platform

Accession:: GPL3648

ID:: 100003648

Select item 3003035695.

Planktonic growth, 13503932

Organism:: Actinobacillus pleuropneumoniae

Source name:: SUS 300307_12 (channel 1) NEG 090307_12 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303569

ID:: 300303569

Select item 3003035686.

Planktonic growth, 13503930

Organism:: Actinobacillus pleuropneumoniae

Source name:: SUS 300307_11 (channel 1) NEG 090307_11 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303568

ID:: 300303568

Select item 3003035677.

Planktonic growth, 13503929

Organism:: Actinobacillus pleuropneumoniae

Source name:: SUS 141206_12 (channel 1) NEG 141206_12 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303567

ID:: 300303567

Select item 3003035668.

Planktonic growth, 13503928

Organism:: Actinobacillus pleuropneumoniae

Source name:: SUS 141206_11 (channel 1) NEG 141206_11 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303566

ID:: 300303566

Select item 3003035659.

Adherent growth, 13303308

Organism:: Actinobacillus pleuropneumoniae

Source name:: ADH 140307 (channel 1) NEG 280207_12 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303565

ID:: 300303565

Select item 30030356410.

Adherent growth, 13303306

Organism:: Actinobacillus pleuropneumoniae

Source name:: ADH 130407_12 (channel 1) NEG 090507_12 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303564

ID:: 300303564

Select item 30030356311.

Adherent growth, 13303302

Organism:: Actinobacillus pleuropneumoniae

Source name:: ADH 130407_21 (channel 1) NEG 280207_11 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303563

ID:: 300303563

Select item 30030356212.

Adherent growth, 13303931

Organism:: Actinobacillus pleuropneumoniae

Source name:: ADH 130407_11 (channel 1) NEG 090507_11 (channel 2)

Platform:: GPL3648
Series:: GSE12009

Download data: MEV

Sample

Accession:: GSM303562

ID:: 300303562

Select item 30014709813.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 061121+ (channel 1) 061121- (channel 2)

Platform:: GPL3648
Series:: GSE6366

Download data: MEV

Sample

Accession:: GSM147098

ID:: 300147098

Select item 30014709714.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 061511+ (channel 1) 061115- (channel 2)

Platform:: GPL3648
Series:: GSE6366

Download data: MEV

Sample

Accession:: GSM147097

ID:: 300147097

Select item 30014709615.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 061121+ (channel 1) 061121- (channel 2)

Platform:: GPL3648
Series:: GSE6366

Download data: MEV

Sample

Accession:: GSM147096

ID:: 300147096

Select item 30014709516.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 061108+ (channel 1) 061108+ (channel 2)

Platform:: GPL3648
Series:: GSE6366

Download data: MEV

Sample

Accession:: GSM147095

ID:: 300147095

Select item 30010544317.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 230205+ (channel 1) 280205- (channel 2)

Platform:: GPL3648
Series:: GSE4674

Download data: TXT

Sample

Accession:: GSM105443

ID:: 300105443

Select item 30010544218.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 130505+ (channel 1) 130505- (channel 2)

Platform:: GPL3648
Series:: GSE4674

Download data: TXT

Sample

Accession:: GSM105442

ID:: 300105442

Select item 30010544119.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 280405+ (channel 1) 280405- (channel 2)

Platform:: GPL3648
Series:: GSE4674

Download data: TXT

Sample

Accession:: GSM105441

ID:: 300105441

Select item 30010544020.

Organism:: Actinobacillus pleuropneumoniae

Source name:: 190405+ (channel 1) 190405- (channel 2)

Platform:: GPL3648
Series:: GSE4674

Download data: TXT

Sample

Accession:: GSM105440

ID:: 300105440

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