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BioProject

Organizing biological data

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Items: 18

Select item 10941301.

Baseline Aging

Metabolic modeling reveals the aging-associated decline of host-microbiome metabolic interactions in mice

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Christian-Albrechts-University Kiel

Accession:: PRJEB73981
ID:: 1094130

Select item 9315382.

Mouse Gastrointestinal Bacteria Catalogue - MAGs

Additional genomes (MAGs) of the Mouse Gastrointestinal Bacteria Catalogue

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

UNIVERSITY OF CAMBRIDGE

Accession:: PRJEB59335
ID:: 931538

Select item 9059993.

EMG produced TPA metagenomics assembly of PRJNA755428 data set (Green tea polyphenols modulate gut virome diversity).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB57834
ID:: 905999

Select item 9018454.

EMG produced TPA metagenomics assembly of PRJNA753725 data set (Changes of intestinal resistance genome induced by diet).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB57440
ID:: 901845

Select item 9018135.

EMG produced TPA metagenomics assembly of PRJNA750880 data set (Mouse intestinal phages-Health and alcohol feeding).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB57301
ID:: 901813

Select item 8916076.

EMG produced TPA metagenomics assembly of PRJNA771488 data set (Dynamic impact of Blautia producta on gut microbiota).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB56769
ID:: 891607

Select item 8893117.

EMG produced TPA metagenomics assembly of PRJNA732220 data set (Gut microbiota of pregnant C57BL/6J mice).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB56583
ID:: 889311

Select item 8801028.

EMG produced TPA metagenomics assembly of PRJNA694540 data set (Effect of amylin on intestinal microflora in mice).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB55923
ID:: 880102

Select item 8758729.

EMG produced TPA metagenomics assembly of PRJEB9443 data set (Integrated microbiome and host profiling in a mouse model of colitis suggests host immune activity drives changes in the gut micro-environment that influence both microbial community structure and gene expression).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB55680
ID:: 875872

Select item 87467010.

EMG produced TPA metagenomics assembly of PRJNA739153 data set (Aging male C57bl/6 mouse gut microbiome).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB55619
ID:: 874670

Select item 73935311.

Mouse Gastrointestinal Bacteria Catalogue - MAGs

Representative genomes (MAGs) of the Mouse Gastrointestinal Bacteria Catalogue

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

UNIVERSITY OF CAMBRIDGE

Accession:: PRJEB45234
ID:: 739353

Select item 63054212.

We established morphine-induced conditioned place preference (CPP) rat models, and adopted 16s rRNA sequencing of fecal bacterial communities. Raw sequence reads

: Project data type: Raw sequence reads

Scope:: Multispecies

Department of Psychiatry, Second Xiangya Hospital, Central South University

Accession:: PRJNA630542
ID:: 630542

Select item 55959813.

We established morphine-induced conditioned place preference (CPP) rat models, and adopted 16s rRNA sequencing of fecal bacterial communities. Raw sequence reads

: Project data type: Raw sequence reads

Scope:: Multispecies

The Second Xiangya Hospital, Central South University

Accession:: PRJNA559598
ID:: 559598

Select item 54830414.

An integrated metagenome catalog reveals new insights into the murine gut microbiome

The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

HELMHOLTZ CENTRE FOR INFECTION RESEARCH

Accession:: PRJEB32890
ID:: 548304

Select item 48112015.

Mouse microbiota single cell genomes

: Project data type: Raw sequence reads

Scope:: Multispecies

Gladstone Institutes

Accession:: PRJNA481120
ID:: 481120

Select item 22411616.

Refseq Prokaryotic Genome Annotation Project

: Project data type: RefSeq Other

Scope:: Multispecies

NCBI

Accession:: PRJNA224116
ID:: 224116

Select item 11378117.

Helicobacter hepaticus

fliA regulon of Helicobacter hepaticus

Taxonomy:: Helicobacter hepaticus

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Institute for Medical Microbiology, Hannover Medical School

Accession:: PRJNA113781
ID:: 113781

Select item 18518.

Helicobacter hepaticus ATCC 51449

Causes hepatitis, typhlitis, hepatocellular tumors, and gastric bowel disease

Taxonomy:: Helicobacter hepaticus ATCC 51449

: Project data type: Genome sequencing

Scope:: Monoisolate

Univ. Wuerzburg

Accession:: PRJNA185
ID:: 185

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