ID 889311 - BioProject

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Accession: PRJEB56583 ID: 889311

EMG produced TPA metagenomics assembly of PRJNA732220 data set (Gut microbiota of pregnant C57BL/6J mice).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA732220, and was assembled with SPAdes v3. More...

Accession	PRJEB56583
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 11-Oct-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1699
WGS master	133
Publications
PubMed	1
PMC	1
Other datasets
BioSample	133
Assembly	133

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

133
133

Assembly	WGS	BioSample	Taxonomy
GCA_947346605.1	CANABO000000000	SAMEA112132282	Bacteroides acidifaciens
GCA_947345775.1	CAMZYX000000000	SAMEA112132285	Bifidobacterium pseudolongum
GCA_947346645.1	CANACF000000000	SAMEA112132274	Faecalibaculum rodentium
GCA_947346255.1	CANAAL000000000	SAMEA112132257	Faecalibaculum rodentium
GCA_947346345.1	CANAAU000000000	SAMEA112132363	Helicobacter hepaticus
GCA_947346215.1	CANAAH000000000	SAMEA112132342	Helicobacter typhlonius
GCA_947346555.1	CANABN000000000	SAMEA112132279	Lactobacillus gasseri
GCA_947345795.1	CAMZYP000000000	SAMEA112132249	Lactobacillus intestinalis
GCA_947346135.1	CAMZZM000000000	SAMEA112132321	Muribaculum intestinale
GCA_947345905.1	CAMZZE000000000	SAMEA112132345	Turicimonas muris
GCA_947346015.1	CAMZZK000000000	SAMEA112132351	uncultured Alistipes sp.
GCA_947346715.1	CANABT000000000	SAMEA112132289	uncultured Alistipes sp.
GCA_947346165.1	CANAAB000000000	SAMEA112132259	uncultured Alphaproteobacteria bacterium
GCA_947345815.1	CAMZYU000000000	SAMEA112132346	uncultured Alphaproteobacteria bacterium
GCA_947345805.1	CAMZYV000000000	SAMEA112132372	uncultured Alphaproteobacteria bacterium
GCA_947346395.1	CANAAY000000000	SAMEA112132325	uncultured Anaerotruncus sp.
GCA_947346035.1	CAMZZR000000000	SAMEA112132265	uncultured Azospirillum sp.
GCA_947345585.1	CAMZYM000000000	SAMEA112132280	uncultured Bacteroidales bacterium
GCA_947346725.1	CANABY000000000	SAMEA112132264	uncultured Bacteroidales bacterium
GCA_947346195.1	CANAAF000000000	SAMEA112132258	uncultured Bacteroidales bacterium
GCA_947346125.1	CAMZZL000000000	SAMEA112132291	uncultured Bacteroides sp.
GCA_947346565.1	CANABP000000000	SAMEA112132281	uncultured Bacteroides sp.
GCA_947346675.1	CANABR000000000	SAMEA112132347	uncultured Candidatus Saccharibacteria bacterium
GCA_947345895.1	CAMZYW000000000	SAMEA112132250	uncultured Clostridia bacterium
GCA_947346205.1	CANAAG000000000	SAMEA112132290	uncultured Clostridia bacterium
GCA_947346445.1	CANABJ000000000	SAMEA112132357	uncultured Clostridia bacterium
GCA_947346055.1	CAMZZZ000000000	SAMEA112132312	uncultured Clostridia bacterium
GCA_947346335.1	CANAAS000000000	SAMEA112132360	uncultured Clostridia bacterium
GCA_947346145.1	CANAAA000000000	SAMEA112132374	uncultured Clostridia bacterium
GCA_947345915.1	CAMZZB000000000	SAMEA112132376	uncultured Clostridia bacterium
GCA_947346315.1	CANAAR000000000	SAMEA112132329	uncultured Clostridia bacterium
GCA_947345845.1	CAMZZD000000000	SAMEA112132337	uncultured Clostridia bacterium
GCA_947346075.1	CAMZZP000000000	SAMEA112132268	uncultured Clostridia bacterium
GCA_947346185.1	CANAAE000000000	SAMEA112132287	uncultured Clostridia bacterium
GCA_947346525.1	CANABG000000000	SAMEA112132371	uncultured Clostridia bacterium
GCA_947346665.1	CANACC000000000	SAMEA112132318	uncultured Clostridia bacterium
GCA_947345465.1	CAMZXK000000000	SAMEA112132334	uncultured Clostridia bacterium
GCA_947346355.1	CANAAT000000000	SAMEA112132332	uncultured Clostridia bacterium
GCA_947346775.1	CANABS000000000	SAMEA112132303	uncultured Clostridia bacterium
GCA_947346225.1	CANAAI000000000	SAMEA112132343	uncultured Clostridium sp.
GCA_947346915.1	CANACM000000000	SAMEA112132352	uncultured Clostridium sp.
GCA_947346415.1	CANABB000000000	SAMEA112132353	uncultured Clostridium sp.
GCA_947346815.1	CANACI000000000	SAMEA112132358	uncultured Desulfovibrio sp.
GCA_947346485.1	CANABC000000000	SAMEA112132369	uncultured Desulfovibrio sp.
GCA_947346745.1	CANACE000000000	SAMEA112132373	uncultured Desulfovibrio sp.
GCA_947345695.1	CAMZYE000000000	SAMEA112132267	uncultured Erysipelotrichaceae bacterium
GCA_947345505.1	CAMZYA000000000	SAMEA112132295	uncultured Eubacterium sp.
GCA_947346295.1	CANAAP000000000	SAMEA112132350	uncultured Eubacterium sp.
GCA_947346885.1	CANACK000000000	SAMEA112132338	uncultured Eubacterium sp.
GCA_947346365.1	CANAAV000000000	SAMEA112132356	uncultured Flavonifractor sp.
GCA_947345995.1	CAMZZV000000000	SAMEA112132339	uncultured Hungatella sp.
GCA_947345885.1	CAMZZC000000000	SAMEA112132256	uncultured Lachnoclostridium sp.
GCA_947345455.1	CAMZXZ000000000	SAMEA112132301	uncultured Lachnoclostridium sp.
GCA_947346405.1	CANAAZ000000000	SAMEA112132317	uncultured Lachnoclostridium sp.
GCA_947345445.1	CAMZXO000000000	SAMEA112132331	uncultured Lachnoclostridium sp.
GCA_947346655.1	CANACA000000000	SAMEA112132269	uncultured Lachnospiraceae bacterium
GCA_947346155.1	CANAAC000000000	SAMEA112132368	uncultured Lachnospiraceae bacterium
GCA_947345705.1	CAMZYN000000000	SAMEA112132272	uncultured Lachnospiraceae bacterium
GCA_947345835.1	CAMZYY000000000	SAMEA112132336	uncultured Lachnospiraceae bacterium
GCA_947345495.1	CAMZXY000000000	SAMEA112132300	uncultured Lachnospiraceae bacterium
GCA_947346095.1	CAMZZO000000000	SAMEA112132341	uncultured Lachnospiraceae bacterium
GCA_947346265.1	CANAAN000000000	SAMEA112132252	uncultured Lachnospiraceae bacterium
GCA_947346615.1	CANABQ000000000	SAMEA112132263	uncultured Lachnospiraceae bacterium
GCA_947346455.1	CANABI000000000	SAMEA112132364	uncultured Lachnospiraceae bacterium
GCA_947345945.1	CAMZZY000000000	SAMEA112132319	uncultured Lachnospiraceae bacterium
GCA_947346425.1	CANABA000000000	SAMEA112132349	uncultured Lachnospiraceae bacterium
GCA_947346685.1	CANACD000000000	SAMEA112132305	uncultured Lachnospiraceae bacterium
GCA_947345925.1	CAMZZG000000000	SAMEA112132254	uncultured Lachnospiraceae bacterium
GCA_947346175.1	CANAAD000000000	SAMEA112132255	uncultured Lachnospiraceae bacterium
GCA_947345485.1	CAMZXX000000000	SAMEA112132306	uncultured Lachnospiraceae bacterium
GCA_947346085.1	CAMZZJ000000000	SAMEA112132324	uncultured Lachnospiraceae bacterium
GCA_947346025.1	CAMZZI000000000	SAMEA112132355	uncultured Lachnospiraceae bacterium
GCA_947345475.1	CAMZXP000000000	SAMEA112132296	uncultured Lachnospiraceae bacterium
GCA_947346755.1	CANABZ000000000	SAMEA112132327	uncultured Lachnospiraceae bacterium
GCA_947345635.1	CAMZYJ000000000	SAMEA112132275	uncultured Lachnospiraceae bacterium
GCA_947346435.1	CANABK000000000	SAMEA112132367	uncultured Lachnospiraceae bacterium
GCA_947345955.1	CAMZZT000000000	SAMEA112132359	uncultured Lachnospiraceae bacterium
GCA_947346065.1	CAMZZX000000000	SAMEA112132326	uncultured Lachnospiraceae bacterium
GCA_947346305.1	CANAAQ000000000	SAMEA112132294	uncultured Lactobacillus sp.
GCA_947346115.1	CAMZZS000000000	SAMEA112132297	uncultured Lactobacillus sp.
GCA_947345825.1	CAMZYO000000000	SAMEA112132344	uncultured Mollicutes bacterium
GCA_947346475.1	CANABH000000000	SAMEA112132365	uncultured Mucispirillum sp.
GCA_947345675.1	CAMZYH000000000	SAMEA112132278	uncultured Muribaculaceae bacterium
GCA_947346495.1	CANABD000000000	SAMEA112132375	uncultured Muribaculaceae bacterium
GCA_947346695.1	CANACB000000000	SAMEA112132309	uncultured Muribaculaceae bacterium
GCA_947345755.1	CAMZYT000000000	SAMEA112132380	uncultured Muribaculaceae bacterium
GCA_947346245.1	CANAAK000000000	SAMEA112132320	uncultured Muribaculaceae bacterium
GCA_947346845.1	CANACJ000000000	SAMEA112132310	uncultured Muribaculaceae bacterium
GCA_947345365.1	CAMZXQ000000000	SAMEA112132313	uncultured Muribaculaceae bacterium
GCA_947346625.1	CANABU000000000	SAMEA112132308	uncultured Muribaculaceae bacterium
GCA_947346535.1	CANABF000000000	SAMEA112132378	uncultured Muribaculaceae bacterium
GCA_947345875.1	CAMZYS000000000	SAMEA112132248	uncultured Muribaculaceae bacterium
GCA_947345625.1	CAMZYK000000000	SAMEA112132270	uncultured Mycoplasmatota bacterium
GCA_947345425.1	CAMZXW000000000	SAMEA112132302	uncultured Odoribacter sp.
GCA_947346765.1	CANACG000000000	SAMEA112132277	uncultured Parabacteroides sp.
GCA_947345855.1	CAMZYR000000000	SAMEA112132251	uncultured Porphyromonadaceae bacterium
GCA_947345355.1	CAMZXM000000000	SAMEA112132311	uncultured Porphyromonadaceae bacterium
GCA_947345785.1	CAMZYQ000000000	SAMEA112132262	uncultured Porphyromonadaceae bacterium
GCA_947345435.1	CAMZXT000000000	SAMEA112132292	uncultured Porphyromonadaceae bacterium
GCA_947346275.1	CANAAM000000000	SAMEA112132379	uncultured Porphyromonadaceae bacterium
GCA_947345615.1	CAMZYL000000000	SAMEA112132273	uncultured Porphyromonadaceae bacterium
GCA_947345375.1	CAMZXL000000000	SAMEA112132307	uncultured Porphyromonadaceae bacterium
GCA_947345865.1	CAMZYZ000000000	SAMEA112132253	uncultured Porphyromonadaceae bacterium
GCA_947346735.1	CANABW000000000	SAMEA112132261	uncultured Porphyromonadaceae bacterium
GCA_947346465.1	CANABE000000000	SAMEA112132370	uncultured Porphyromonadaceae bacterium
GCA_947345975.1	CAMZZH000000000	SAMEA112132315	uncultured Porphyromonadaceae bacterium
GCA_947345715.1	CAMZYD000000000	SAMEA112132283	uncultured Porphyromonadaceae bacterium
GCA_947346375.1	CANAAW000000000	SAMEA112132266	uncultured Porphyromonadaceae bacterium
GCA_947345345.1	CAMZXN000000000	SAMEA112132304	uncultured Porphyromonadaceae bacterium
GCA_947346785.1	CANABX000000000	SAMEA112132298	uncultured Porphyromonadaceae bacterium
GCA_947346515.1	CANABL000000000	SAMEA112132377	uncultured Porphyromonadaceae bacterium
GCA_947345525.1	CAMZYC000000000	SAMEA112132288	uncultured Porphyromonadaceae bacterium
GCA_947345665.1	CAMZYB000000000	SAMEA112132271	uncultured Porphyromonadaceae bacterium
GCA_947345595.1	CAMZYG000000000	SAMEA112132286	uncultured Porphyromonadaceae bacterium
GCA_947345555.1	CAMZYI000000000	SAMEA112132284	uncultured Porphyromonadaceae bacterium
GCA_947346635.1	CANABV000000000	SAMEA112132293	uncultured Prevotella sp.
GCA_947346575.1	CANABM000000000	SAMEA112132276	uncultured Prevotella sp.
GCA_947345645.1	CAMZYF000000000	SAMEA112132260	uncultured Rickettsiales bacterium
GCA_947345965.1	CAMZZQ000000000	SAMEA112132316	uncultured Rikenella sp.
GCA_947345385.1	CAMZXV000000000	SAMEA112132322	uncultured Roseburia sp.
GCA_947345985.1	CAMZZU000000000	SAMEA112132361	uncultured Roseburia sp.
GCA_947346045.1	CAMZZW000000000	SAMEA112132348	uncultured Roseburia sp.
GCA_947346385.1	CANAAX000000000	SAMEA112132314	uncultured Roseburia sp.
GCA_947345935.1	CAMZZN000000000	SAMEA112132362	uncultured Ruminococcus sp.
GCA_947346855.1	CANACL000000000	SAMEA112132323	uncultured Turicibacter sp.
GCA_947346235.1	CANAAJ000000000	SAMEA112132354	uncultured bacterium
GCA_947345395.1	CAMZXR000000000	SAMEA112132366	uncultured bacterium
GCA_947346705.1	CANACH000000000	SAMEA112132299	uncultured bacterium
GCA_947345735.1	CAMZZA000000000	SAMEA112132335	uncultured bacterium
GCA_947345415.1	CAMZXS000000000	SAMEA112132330	uncultured bacterium
GCA_947345405.1	CAMZXU000000000	SAMEA112132333	uncultured bacterium
GCA_947345765.1	CAMZZF000000000	SAMEA112132340	uncultured bacterium
GCA_947346285.1	CANAAO000000000	SAMEA112132328	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA732220 data set (Gut microbiota of pregnant C57BL/6J mice).

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