ID 880102 - BioProject

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Accession: PRJEB55923 ID: 880102

EMG produced TPA metagenomics assembly of PRJNA694540 data set (Effect of amylin on intestinal microflora in mice).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA694540, and was assembled with metaSPAdes v3. More...

Accession	PRJEB55923
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 13-Sep-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	718
WGS master	126
Publications
PubMed	1
PMC	1
Other datasets
BioSample	126
Assembly	126

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

126
126

Assembly	WGS	BioSample	Taxonomy
GCA_947053855.1	CAMRUR000000000	SAMEA111454555	Bacteroides acidifaciens
GCA_947053955.1	CAMRUI000000000	SAMEA111454675	Helicobacter hepaticus
GCA_947054555.1	CAMRWY000000000	SAMEA111454618	Helicobacter japonicus
GCA_947053575.1	CAMRTG000000000	SAMEA111454648	Mucispirillum schaedleri
GCA_947053905.1	CAMRTZ000000000	SAMEA111454673	uncultured Alistipes sp.
GCA_947053625.1	CAMRTF000000000	SAMEA111454645	uncultured Alistipes sp.
GCA_947054435.1	CAMRWM000000000	SAMEA111454630	uncultured Alistipes sp.
GCA_947053825.1	CAMRUH000000000	SAMEA111454556	uncultured Alistipes sp.
GCA_947054205.1	CAMRVQ000000000	SAMEA111454636	uncultured Alistipes sp.
GCA_947054095.1	CAMRVF000000000	SAMEA111454659	uncultured Alistipes sp.
GCA_947054425.1	CAMRWQ000000000	SAMEA111454620	uncultured Alistipes sp.
GCA_947053785.1	CAMRUJ000000000	SAMEA111454559	uncultured Alistipes sp.
GCA_947053615.1	CAMRTK000000000	SAMEA111454647	uncultured Alistipes sp.
GCA_947054125.1	CAMRVJ000000000	SAMEA111454628	uncultured Alistipes sp.
GCA_947054455.1	CAMRWN000000000	SAMEA111454590	uncultured Alphaproteobacteria bacterium
GCA_947054035.1	CAMRUT000000000	SAMEA111454631	uncultured Alphaproteobacteria bacterium
GCA_947053375.1	CAMRSP000000000	SAMEA111454617	uncultured Alphaproteobacteria bacterium
GCA_947053455.1	CAMRSV000000000	SAMEA111454669	uncultured Alphaproteobacteria bacterium
GCA_947054235.1	CAMRVK000000000	SAMEA111454641	uncultured Azospirillum sp.
GCA_947053485.1	CAMRTA000000000	SAMEA111454664	uncultured Bacillota bacterium
GCA_947053645.1	CAMRTM000000000	SAMEA111454569	uncultured Bacillota bacterium
GCA_947053605.1	CAMRTE000000000	SAMEA111454609	uncultured Bacillota bacterium
GCA_947054285.1	CAMRVY000000000	SAMEA111454644	uncultured Bacillota bacterium
GCA_947053735.1	CAMRTV000000000	SAMEA111454564	uncultured Bacteroidales bacterium
GCA_947054015.1	CAMRUU000000000	SAMEA111454614	uncultured Bacteroidales bacterium
GCA_947053335.1	CAMRSH000000000	SAMEA111454585	uncultured Bacteroidales bacterium
GCA_947053795.1	CAMRUF000000000	SAMEA111454562	uncultured Bacteroidales bacterium
GCA_947053685.1	CAMRTR000000000	SAMEA111454573	uncultured Bacteroidales bacterium
GCA_947053445.1	CAMRSO000000000	SAMEA111454572	uncultured Bacteroides sp.
GCA_947054075.1	CAMRVE000000000	SAMEA111454655	uncultured Bacteroides sp.
GCA_947054255.1	CAMRVU000000000	SAMEA111454642	uncultured Bacteroides sp.
GCA_947053395.1	CAMRSG000000000	SAMEA111454580	uncultured Candidatus Saccharibacteria bacterium
GCA_947053925.1	CAMRUG000000000	SAMEA111454560	uncultured Clostridia bacterium
GCA_947054395.1	CAMRWL000000000	SAMEA111454646	uncultured Clostridia bacterium
GCA_947054465.1	CAMRWO000000000	SAMEA111454595	uncultured Clostridia bacterium
GCA_947054085.1	CAMRVD000000000	SAMEA111454666	uncultured Clostridia bacterium
GCA_947053965.1	CAMRUX000000000	SAMEA111454624	uncultured Clostridia bacterium
GCA_947053325.1	CAMRSN000000000	SAMEA111454583	uncultured Clostridia bacterium
GCA_947053985.1	CAMRUY000000000	SAMEA111454612	uncultured Clostridia bacterium
GCA_947053555.1	CAMRTC000000000	SAMEA111454658	uncultured Clostridia bacterium
GCA_947053675.1	CAMRTQ000000000	SAMEA111454575	uncultured Clostridia bacterium
GCA_947053475.1	CAMRTD000000000	SAMEA111454661	uncultured Clostridia bacterium
GCA_947053655.1	CAMRTO000000000	SAMEA111454622	uncultured Clostridia bacterium
GCA_947054315.1	CAMRWD000000000	SAMEA111454596	uncultured Clostridia bacterium
GCA_947054275.1	CAMRVL000000000	SAMEA111454603	uncultured Clostridia bacterium
GCA_947053665.1	CAMRTP000000000	SAMEA111454574	uncultured Clostridia bacterium
GCA_947053305.1	CAMRSK000000000	SAMEA111454613	uncultured Clostridia bacterium
GCA_947053465.1	CAMRSW000000000	SAMEA111454668	uncultured Clostridia bacterium
GCA_947053595.1	CAMRSX000000000	SAMEA111454651	uncultured Clostridia bacterium
GCA_947053505.1	CAMRSU000000000	SAMEA111454663	uncultured Clostridia bacterium
GCA_947053935.1	CAMRUK000000000	SAMEA111454552	uncultured Clostridia bacterium
GCA_947054545.1	CAMRWZ000000000	SAMEA111454581	uncultured Clostridia bacterium
GCA_947053945.1	CAMRUL000000000	SAMEA111454554	uncultured Clostridia bacterium
GCA_947053365.1	CAMRSF000000000	SAMEA111454578	uncultured Clostridia bacterium
GCA_947054175.1	CAMRVO000000000	SAMEA111454629	uncultured Clostridia bacterium
GCA_947054045.1	CAMRUW000000000	SAMEA111454611	uncultured Clostridia bacterium
GCA_947053545.1	CAMRSY000000000	SAMEA111454662	uncultured Clostridia bacterium
GCA_947053435.1	CAMRSJ000000000	SAMEA111454571	uncultured Clostridia bacterium
GCA_947054495.1	CAMRWV000000000	SAMEA111454619	uncultured Clostridia bacterium
GCA_947054155.1	CAMRVM000000000	SAMEA111454639	uncultured Desulfovibrio sp.
GCA_947053815.1	CAMRUQ000000000	SAMEA111454672	uncultured Eubacterium sp.
GCA_947054485.1	CAMRWS000000000	SAMEA111454591	uncultured Helicobacter sp.
GCA_947053995.1	CAMRVA000000000	SAMEA111454608	uncultured Lachnoclostridium sp.
GCA_947054025.1	CAMRVB000000000	SAMEA111454643	uncultured Lachnospiraceae bacterium
GCA_947053415.1	CAMRST000000000	SAMEA111454577	uncultured Lachnospiraceae bacterium
GCA_947054105.1	CAMRVI000000000	SAMEA111454656	uncultured Lachnospiraceae bacterium
GCA_947054065.1	CAMRVG000000000	SAMEA111454606	uncultured Lachnospiraceae bacterium
GCA_947053635.1	CAMRTL000000000	SAMEA111454650	uncultured Lachnospiraceae bacterium
GCA_947053535.1	CAMRTI000000000	SAMEA111454654	uncultured Lachnospiraceae bacterium
GCA_947053495.1	CAMRTN000000000	SAMEA111454667	uncultured Lachnospiraceae bacterium
GCA_947053385.1	CAMRSQ000000000	SAMEA111454610	uncultured Lachnospiraceae bacterium
GCA_947053835.1	CAMRUP000000000	SAMEA111454561	uncultured Lachnospiraceae bacterium
GCA_947054225.1	CAMRVV000000000	SAMEA111454605	uncultured Lachnospiraceae bacterium
GCA_947054195.1	CAMRWA000000000	SAMEA111454638	uncultured Lachnospiraceae bacterium
GCA_947053715.1	CAMRTT000000000	SAMEA111454568	uncultured Lachnospiraceae bacterium
GCA_947053345.1	CAMRSM000000000	SAMEA111454615	uncultured Lachnospiraceae bacterium
GCA_947054345.1	CAMRWH000000000	SAMEA111454589	uncultured Lachnospiraceae bacterium
GCA_947053895.1	CAMRUM000000000	SAMEA111454676	uncultured Lachnospiraceae bacterium
GCA_947054525.1	CAMRWX000000000	SAMEA111454587	uncultured Lachnospiraceae bacterium
GCA_947053885.1	CAMRUS000000000	SAMEA111454671	uncultured Lachnospiraceae bacterium
GCA_947054005.1	CAMRUV000000000	SAMEA111454640	uncultured Lachnospiraceae bacterium
GCA_947053525.1	CAMRTB000000000	SAMEA111454665	uncultured Lactobacillus sp.
GCA_947054515.1	CAMRWW000000000	SAMEA111454582	uncultured Mollicutes bacterium
GCA_947053875.1	CAMRUN000000000	SAMEA111454674	uncultured Mucispirillum sp.
GCA_947054445.1	CAMRWP000000000	SAMEA111454579	uncultured Muribaculaceae bacterium
GCA_947054355.1	CAMRWE000000000	SAMEA111454588	uncultured Muribaculaceae bacterium
GCA_947054265.1	CAMRVN000000000	SAMEA111454601	uncultured Muribaculaceae bacterium
GCA_947054295.1	CAMRVT000000000	SAMEA111454632	uncultured Muribaculaceae bacterium
GCA_947054115.1	CAMRVH000000000	SAMEA111454649	uncultured Muribaculaceae bacterium
GCA_947053405.1	CAMRSL000000000	SAMEA111454566	uncultured Muribaculaceae bacterium
GCA_947054145.1	CAMRVR000000000	SAMEA111454586	uncultured Muribaculaceae bacterium
GCA_947054135.1	CAMRVP000000000	SAMEA111454599	uncultured Muribaculaceae bacterium
GCA_947054325.1	CAMRWB000000000	SAMEA111454634	uncultured Mycoplasmataceae bacterium
GCA_947054335.1	CAMRWG000000000	SAMEA111454593	uncultured Odoribacter sp.
GCA_947054245.1	CAMRVS000000000	SAMEA111454600	uncultured Odoribacter sp.
GCA_947053755.1	CAMRTX000000000	SAMEA111454558	uncultured Odoribacter sp.
GCA_947053865.1	CAMRUC000000000	SAMEA111454670	uncultured Odoribacter sp.
GCA_947053315.1	CAMRSR000000000	SAMEA111454616	uncultured Parabacteroides sp.
GCA_947053565.1	CAMRSZ000000000	SAMEA111454653	uncultured Porphyromonadaceae bacterium
GCA_947054365.1	CAMRWF000000000	SAMEA111454594	uncultured Porphyromonadaceae bacterium
GCA_947053745.1	CAMRTW000000000	SAMEA111454570	uncultured Porphyromonadaceae bacterium
GCA_947053725.1	CAMRTU000000000	SAMEA111454565	uncultured Porphyromonadaceae bacterium
GCA_947053975.1	CAMRUZ000000000	SAMEA111454635	uncultured Porphyromonadaceae bacterium
GCA_947054415.1	CAMRWR000000000	SAMEA111454627	uncultured Porphyromonadaceae bacterium
GCA_947053805.1	CAMRUA000000000	SAMEA111454551	uncultured Porphyromonadaceae bacterium
GCA_947053585.1	CAMRTJ000000000	SAMEA111454657	uncultured Porphyromonadaceae bacterium
GCA_947054305.1	CAMRWC000000000	SAMEA111454598	uncultured Porphyromonadaceae bacterium
GCA_947053355.1	CAMRSS000000000	SAMEA111454584	uncultured Porphyromonadaceae bacterium
GCA_947053765.1	CAMRTY000000000	SAMEA111454557	uncultured Porphyromonadaceae bacterium
GCA_947053775.1	CAMRUB000000000	SAMEA111454563	uncultured Porphyromonadaceae bacterium
GCA_947053705.1	CAMRTS000000000	SAMEA111454602	uncultured Porphyromonadaceae bacterium
GCA_947054215.1	CAMRVX000000000	SAMEA111454597	uncultured Porphyromonadaceae bacterium
GCA_947054475.1	CAMRWT000000000	SAMEA111454623	uncultured Porphyromonadaceae bacterium
GCA_947053425.1	CAMRSI000000000	SAMEA111454604	uncultured Prevotella sp.
GCA_947053845.1	CAMRUE000000000	SAMEA111454553	uncultured Prevotella sp.
GCA_947054505.1	CAMRWU000000000	SAMEA111454607	uncultured Pseudomonadota bacterium
GCA_947053915.1	CAMRUO000000000	SAMEA111454660	uncultured Rikenella sp.
GCA_947054185.1	CAMRVW000000000	SAMEA111454637	uncultured Rikenellaceae bacterium
GCA_947054535.1	CAMRXA000000000	SAMEA111454576	uncultured Roseburia sp.
GCA_947054375.1	CAMRWI000000000	SAMEA111454625	uncultured Sutterellaceae bacterium
GCA_947054165.1	CAMRVZ000000000	SAMEA111454626	uncultured Turicibacter sp.
GCA_947053515.1	CAMRTH000000000	SAMEA111454652	uncultured bacterium
GCA_947054385.1	CAMRWJ000000000	SAMEA111454621	uncultured bacterium
GCA_947054055.1	CAMRVC000000000	SAMEA111454592	uncultured bacterium
GCA_947054405.1	CAMRWK000000000	SAMEA111454633	uncultured bacterium
GCA_947053695.1	CAMRUD000000000	SAMEA111454567	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA694540 data set (Effect of amylin on intestinal microflora in mice).

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