Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567847: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319734' containing sample 'VET1875R' from individual 'VET0162'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.5M spots, 914.8M bases, 414Mb downloads

UUID: 33db2c6a-b81d-4247-995f-1e936eeeb46f

Design: Illumina sequencing of Staphylococcus aureus VET1875R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228818 • SRP042892 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1875R

SAMN02404308 • SRS627001 • All experiments • All runs

Organism: Staphylococcus aureus VET1875R

Library:

Name: Pond-319734

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470788.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDGD

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55233

research_project: RP-513

root_sample_id: SM-4PO91

sample_id: SM-5CDGD

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.5M spots, 914.8M bases, 414Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330215	2,241,568	452.8M	205.2Mb	2014-06-03
SRR1346372	2,287,329	462M	208.8Mb	2014-06-06

ID:: 810664

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