Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566907: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319763' containing sample 'VET1845R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 925.4M bases, 427.4Mb downloads

UUID: 823e4584-5851-4ca8-9e6f-796e33606154

Design: Illumina sequencing of Staphylococcus aureus VET1845R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228795 • SRP042770 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1845R

SAMN02404285 • SRS626782 • All experiments • All runs

Organism: Staphylococcus aureus VET1845R

Library:

Name: Pond-319763

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470817.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDH7

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55215

research_project: RP-513

root_sample_id: SM-4PO8D

sample_id: SM-5CDH7

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 925.4M bases, 427.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1328306	2,314,519	467.5M	215.6Mb	2014-06-03
SRR1344798	2,266,646	457.9M	211.8Mb	2014-06-06

ID:: 809724

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