Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX565719: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318314' containing sample 'VET0133R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.1M spots, 1.2G bases, 605Mb downloads

UUID: 28846d9f-6a5c-4f9c-8257-148773725399

Design: Illumina sequencing of Staphylococcus aureus VET0133R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228548 • SRP042654 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0133R

SAMN02404040 • SRS626228 • All experiments • All runs

Organism: Staphylococcus aureus VET0133R

Library:

Name: Pond-318314

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469947.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8P8

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55080

research_project: RP-513

root_sample_id: SM-4P93Q

sample_id: SM-5C8P8

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.1M spots, 1.2G bases, 605Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326141	3,074,291	621M	308.2Mb	2014-06-03
SRR1326980	2,985,082	603M	296.8Mb	2014-06-03

ID:: 808536

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