Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555684: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311288' containing sample 'DICM09/00997-9HST2'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.9M spots, 585.2M bases, 288.4Mb downloads

UUID: 01687dd3-a22a-4480-81e6-80252ab48e9b

Design: Illumina sequencing of Staphylococcus aureus DICM09/00997-9HST2 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226532 • SRP042443 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DICM09/00997-9HST2

SAMN02391404 • SRS622773 • All experiments • All runs

Organism: Staphylococcus aureus DICM09/00997-9HST2

Library:

Name: Pond-311288

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445701.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571UP

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51742

research_project: RP-513

root_sample_id: SM-4PAKR

sample_id: SM-571UP

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.9M spots, 585.2M bases, 288.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303284	2,896,785	585.2M	288.4Mb	2014-05-29

ID:: 794694

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