Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX373483: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282955' containing sample 'Staphylococcus aureus M1529'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 858.2M bases, 390.9Mb downloads

UUID: bec8c62b-66cf-4368-bc55-a6b952c8d43a

Design: Illumina sequencing of Staphylococcus aureus M1529 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221453 • SRP032622 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1529

SAMN02364046 • SRS498845 • All experiments • All runs

Organism: Staphylococcus aureus M1529

Library:

Name: Pond-282955

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409483.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOTE

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48738

research_project: RP-433

root_sample_id: SM-4D1NU

sample_id: SM-4WOTE

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 858.2M bases, 390.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025130	2,136,699	431.6M	196.5Mb	2013-11-05
SRR1025131	2,111,665	426.6M	194.4Mb	2013-11-05

ID:: 533696

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