Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX373476: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282977' containing sample 'Staphylococcus aureus M1519'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 678.8M bases, 310.3Mb downloads

UUID: 6fc47a75-a68a-4c3b-b163-569d28dbee89

Design: Illumina sequencing of Staphylococcus aureus M1519 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221446 • SRP032615 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1519

SAMN02364039 • SRS498838 • All experiments • All runs

Organism: Staphylococcus aureus M1519

Library:

Name: Pond-282977

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409505.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOU1

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48731

research_project: RP-433

root_sample_id: SM-4D1NN

sample_id: SM-4WOU1

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 678.8M bases, 310.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025118	1,690,171	341.4M	155.9Mb	2013-11-05
SRR1025119	1,670,140	337.4M	154.4Mb	2013-11-05

ID:: 533689

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