Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX373423: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-283002' containing sample 'Staphylococcus aureus M1343'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 622.8M bases, 294.4Mb downloads

UUID: a95b313d-8721-4029-994f-8e79c7843eb0

Design: Illumina sequencing of Staphylococcus aureus M1343 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221385 • SRP032562 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1343

SAMN02363978 • SRS498785 • All experiments • All runs

Organism: Staphylococcus aureus M1343

Library:

Name: Pond-283002

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409530.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOUQ

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48679

research_project: RP-433

root_sample_id: SM-4D1LW

sample_id: SM-4WOUQ

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 622.8M bases, 294.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025014	1,536,467	310.4M	146.9Mb	2013-11-05
SRR1025015	1,546,841	312.5M	147.5Mb	2013-11-05

ID:: 533636

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