Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364338: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275801' containing sample 'Staphylococcus aureus M0403'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 645.3M bases, 282.6Mb downloads

UUID: 86af45c1-0aae-4406-b782-cdaa488d0ed9

Design: Illumina sequencing of Staphylococcus aureus M0403 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216437 • SRP031185 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0403

SAMN02325391 • SRS490756 • All experiments • All runs

Organism: Staphylococcus aureus M0403

Library:

Name: Pond-275801

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385984.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJRW

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G44984

research_project: RP-433

root_sample_id: SM-4CYII

sample_id: SM-4RJRW

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 645.3M bases, 282.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011819	1,603,876	324M	141.5Mb	2013-10-16
SRR1011820	1,590,799	321.3M	141.2Mb	2013-10-16

ID:: 521156

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