Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX363620: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277996' containing sample 'Staphylococcus aureus M0898'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4M spots, 805M bases, 355.8Mb downloads

UUID: 0d8e7625-be98-4817-ba66-d429334283ac

Design: Illumina sequencing of Staphylococcus aureus M0898 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216844 • SRP030895 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0898

SAMN02325795 • SRS490250 • All experiments • All runs

Organism: Staphylococcus aureus M0898

Library:

Name: Pond-277996

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394142.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T89H

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46096

research_project: RP-433

root_sample_id: SM-4C9M1

sample_id: SM-4T89H

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4M spots, 805M bases, 355.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010711	1,969,986	397.9M	176.1Mb	2013-10-09
SRR1010712	2,015,381	407.1M	179.6Mb	2013-10-09

ID:: 516057

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