DNA-seq of Escherichia coli: adult female urine - SRA

SRX3031081: DNA-seq of Escherichia coli: adult female urine
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 548.5M bases, 346.5Mb downloads

Design: Illumina Nextera XT DNA sample prep kit

Submitted by: Brigham & Women's Hospital

Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA

PRJNA278886 • SRP056445 • All experiments • All runs

show Abstracthide Abstract

The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.

Sample:

SAMN07410718 • SRS2379969 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: 467

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.2M spots, 548.5M bases, 346.5Mb