Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX1354028: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Schwarzengrund by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.4M spots, 707.1M bases, 446.4Mb downloads

External Id: EXT00142594

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: CFSAN

Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services

PRJNA219491 • SRP033708 • All experiments • All runs

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GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)

Sample:

SAMN03938853 • SRS1120677 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund

Library:

Name: Salmonella enterica subsp. enterica serovar Schwarzengrund Nextera XT shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Schwarzengrund.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.8.5
demultiplexer	1	0	MiSeq Reporter	2.3

Runs: 1 run, 1.4M spots, 707.1M bases, 446.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR2724064	1,448,595	707.1M	446.4Mb	2015-10-19

ID:: 1931638

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