Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX807340: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Senftenberg str. VA-WGS-00397 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 970,796 spots, 462.1M bases, 266.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services

PRJNA219491 • SRP033708 • All experiments • All runs

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GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)

Sample:

SAMN03160771 • SRS788945 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Senftenberg

Library:

Name: Salmonella enterica str. VA-WGS-00397 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Senftenberg str. VA-WGS-00397.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 970,796 spots, 462.1M bases, 266.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1708047	970,796	462.1M	266.4Mb	2014-12-12

ID:: 1157028

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