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SRX494800: Cochlearia officinalis 454 sequencing
1 LS454 (454 GS FLX) run: 459,753 spots, 258.7M bases, 555.9Mb downloads

Submitted by: NRC-ACRD Saskatoon
Study: Brassicaceae species transcriptome analysis
show Abstracthide Abstract
Utilizing Roche''s 454 pyrosequencing technology leaf transcriptomes of a subset of diverse crucifer species were sequenced. Gene repertoires assembled from these transcritome sequences facilitated establishment of a resolved molecular phylogeny of Brassicaceae, and provided a wealth of evolutionary information, including age and relative position of polyploidy as well as lineage separation events experienced by crucifer species.
Sample:
SAMN02691609 • SRS577015 • All experiments • All runs
Library:
Name: Paired end
Instrument: 454 GS FLX
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: size fractionation
Layout: PAIRED
Spot descriptor:
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Runs: 1 run, 459,753 spots, 258.7M bases, 555.9Mb
Run# of Spots# of BasesSizePublished
SRR1198327459,753258.7M555.9Mb2014-06-16

ID:
684897

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