Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566057: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319792' containing sample 'VET0632S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 842.5M bases, 411.4Mb downloads

UUID: 9195aac5-e14e-43a4-b698-4f55b9c45d28

Design: Illumina sequencing of Staphylococcus aureus VET0632S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228847 • SRP042674 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0632S

SAMN02404337 • SRS626313 • All experiments • All runs

Organism: Staphylococcus aureus VET0632S

Library:

Name: Pond-319792

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470846.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDI1

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55257

research_project: RP-513

root_sample_id: SM-4PO9V

sample_id: SM-5CDI1

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 842.5M bases, 411.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326937	2,105,318	425.3M	207.4Mb	2014-06-03
SRR1346414	2,065,319	417.2M	204Mb	2014-06-06

ID:: 808874

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