Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX548557: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311247' containing sample '1(04GN_04-02-52-07)'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.2M spots, 641.2M bases, 311.9Mb downloads

UUID: 5e8660ec-c44e-4a66-a1fa-de0a8e2a76f5

Design: Illumina sequencing of Staphylococcus aureus 1(04GN_04-02-52-07) via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 1(04GN_04-02-52-07)

SAMN02391387 • SRS616385 • All experiments • All runs

Organism: Staphylococcus aureus 1(04GN_04-02-52-07)

Library:

Name: Pond-311247

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445660.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571TJ

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51727

research_project: RP-513

root_sample_id: SM-4PAKA

sample_id: SM-571TJ

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.2M spots, 641.2M bases, 311.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293662	3,174,351	641.2M	311.9Mb	2014-05-21

ID:: 785515

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