Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX368089: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279913' containing sample 'Staphylococcus aureus M1371'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.6M spots, 731.5M bases, 332.6Mb downloads

UUID: c1e6a696-cfa6-4624-987c-ac671ecbb4a2

Design: Illumina sequencing of Staphylococcus aureus M1371 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218375 • SRP032079 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1371

SAMN02350555 • SRS494131 • All experiments • All runs

Organism: Staphylococcus aureus M1371

Library:

Name: Pond-279913

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402365.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJNE

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47839

research_project: RP-433

root_sample_id: SM-4CW7Z

sample_id: SM-4VJNE

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.6M spots, 731.5M bases, 332.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017314	1,810,841	365.8M	166.1Mb	2013-10-25
SRR1017315	1,810,455	365.7M	166.5Mb	2013-10-25

ID:: 526720

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