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Links from Protein

Items: 1 to 20 of 290

1.

rs1490949592 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>A,G [Show Flanks]
    Chromosome:
    6:42963660 (GRCh38)
    6:42931398 (GRCh37)
    Canonical SPDI:
    NC_000006.12:42963659:C:A,NC_000006.12:42963659:C:G
    Gene:
    PEX6 (Varview), GNMT (Varview), CNPY3-GNMT (Varview)
    Functional Consequence:
    coding_sequence_variant,missense_variant,downstream_transcript_variant,non_coding_transcript_variant,500B_downstream_variant
    Validated:
    by frequency,by alfa
    MAF:
    G=0.000028/1 (ALFA)
    A=0.000004/1 (TOPMED)
    HGVS:
    NC_000006.12:g.42963660C>A, NC_000006.12:g.42963660C>G, NC_000006.11:g.42931398C>A, NC_000006.11:g.42931398C>G, NG_008370.1:g.20584G>T, NG_008370.1:g.20584G>C, NG_008396.1:g.7899C>A, NG_008396.1:g.7899C>G, NM_018960.6:c.842C>A, NM_018960.6:c.842C>G, NM_018960.5:c.842C>A, NM_018960.5:c.842C>G, NM_018960.4:c.842C>A, NM_018960.4:c.842C>G, NM_001318865.2:c.785C>A, NM_001318865.2:c.785C>G, NM_001318865.1:c.785C>A, NM_001318865.1:c.785C>G, NR_134899.2:n.713C>A, NR_134899.2:n.713C>G, NR_134899.1:n.713C>A, NR_134899.1:n.713C>G, NM_001318856.2:c.644C>A, NM_001318856.2:c.644C>G, NM_001318856.1:c.644C>A, NM_001318856.1:c.644C>G, NM_001318857.2:c.659C>A, NM_001318857.2:c.659C>G, NM_001318857.1:c.659C>A, NM_001318857.1:c.659C>G, NR_134892.2:n.735C>A, NR_134892.2:n.735C>G, NR_134892.1:n.1085C>A, NR_134892.1:n.1085C>G, NR_134890.2:n.704C>A, NR_134890.2:n.704C>G, NR_134890.1:n.1054C>A, NR_134890.1:n.1054C>G, NM_001318858.2:c.551C>A, NM_001318858.2:c.551C>G, NM_001318858.1:c.551C>A, NM_001318858.1:c.551C>G, NR_134891.2:n.607C>A, NR_134891.2:n.607C>G, NR_134891.1:n.957C>A, NR_134891.1:n.957C>G, NP_061833.1:p.Thr281Asn, NP_061833.1:p.Thr281Ser, NP_001305794.1:p.Thr262Asn, NP_001305794.1:p.Thr262Ser, NP_001305785.1:p.Thr215Asn, NP_001305785.1:p.Thr215Ser, NP_001305786.1:p.Thr220Asn, NP_001305786.1:p.Thr220Ser, NP_001305787.1:p.Thr184Asn, NP_001305787.1:p.Thr184Ser
    3.
    4.

    rs1458275459 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      6:42960910 (GRCh38)
      6:42928648 (GRCh37)
      Canonical SPDI:
      NC_000006.12:42960909:G:A
      Gene:
      GNMT (Varview), CNPY3-GNMT (Varview)
      Functional Consequence:
      non_coding_transcript_variant,coding_sequence_variant,intron_variant,stop_gained
      Validated:
      by frequency
      MAF:
      A=0.000006/1 (GnomAD_exomes)
      HGVS:
      5.

      rs1456262540 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A [Show Flanks]
        Chromosome:
        6:42960897 (GRCh38)
        6:42928635 (GRCh37)
        Canonical SPDI:
        NC_000006.12:42960896:G:A
        Gene:
        GNMT (Varview), CNPY3-GNMT (Varview)
        Functional Consequence:
        non_coding_transcript_variant,coding_sequence_variant,missense_variant,intron_variant
        Validated:
        by cluster
        HGVS:
        6.

        rs1453634585 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          C>G [Show Flanks]
          Chromosome:
          6:42960941 (GRCh38)
          6:42928679 (GRCh37)
          Canonical SPDI:
          NC_000006.12:42960940:C:G
          Gene:
          GNMT (Varview), CNPY3-GNMT (Varview)
          Functional Consequence:
          intron_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant
          Validated:
          by frequency,by alfa
          MAF:
          G=0./0 (ALFA)
          G=0.000014/2 (GnomAD)
          HGVS:
          7.

          rs1443751782 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            G>A [Show Flanks]
            Chromosome:
            6:42960932 (GRCh38)
            6:42928670 (GRCh37)
            Canonical SPDI:
            NC_000006.12:42960931:G:A
            Gene:
            GNMT (Varview), CNPY3-GNMT (Varview)
            Functional Consequence:
            intron_variant,non_coding_transcript_variant,synonymous_variant,coding_sequence_variant
            HGVS:
            8.

            rs1443061926 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>T [Show Flanks]
              Chromosome:
              6:42962286 (GRCh38)
              6:42930024 (GRCh37)
              Canonical SPDI:
              NC_000006.12:42962285:A:T
              Gene:
              GNMT (Varview), CNPY3-GNMT (Varview)
              Functional Consequence:
              intron_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant
              Validated:
              by frequency
              MAF:
              T=0.000004/1 (GnomAD_exomes)
              HGVS:
              9.

              rs1440385005 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>A [Show Flanks]
                Chromosome:
                6:42960847 (GRCh38)
                6:42928585 (GRCh37)
                Canonical SPDI:
                NC_000006.12:42960846:C:A
                Gene:
                GNMT (Varview), CNPY3-GNMT (Varview)
                Functional Consequence:
                coding_sequence_variant,intron_variant,missense_variant,non_coding_transcript_variant
                HGVS:
                10.

                rs1439452041 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  A>G [Show Flanks]
                  Chromosome:
                  6:42963582 (GRCh38)
                  6:42931320 (GRCh37)
                  Canonical SPDI:
                  NC_000006.12:42963581:A:G
                  Gene:
                  PEX6 (Varview), GNMT (Varview), CNPY3-GNMT (Varview)
                  Functional Consequence:
                  500B_downstream_variant,downstream_transcript_variant,coding_sequence_variant,missense_variant,non_coding_transcript_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  G=0./0 (ALFA)
                  G=0.000004/1 (GnomAD_exomes)
                  G=0.000011/3 (TOPMED)
                  HGVS:
                  11.

                  rs1438527012 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    T>C [Show Flanks]
                    Chromosome:
                    6:42962248 (GRCh38)
                    6:42929986 (GRCh37)
                    Canonical SPDI:
                    NC_000006.12:42962247:T:C
                    Gene:
                    GNMT (Varview), CNPY3-GNMT (Varview)
                    Functional Consequence:
                    coding_sequence_variant,intron_variant,synonymous_variant,non_coding_transcript_variant
                    Validated:
                    by frequency,by cluster
                    MAF:
                    C=0.000004/1 (GnomAD_exomes)
                    HGVS:
                    13.

                    rs1436678743 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      6:42960786 (GRCh38)
                      6:42928524 (GRCh37)
                      Canonical SPDI:
                      NC_000006.12:42960785:C:T
                      Gene:
                      GNMT (Varview), CNPY3-GNMT (Varview)
                      Functional Consequence:
                      coding_sequence_variant,intron_variant,missense_variant,non_coding_transcript_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      T=0./0 (ALFA)
                      T=0.000007/1 (GnomAD)
                      HGVS:
                      15.

                      rs1431656965 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        C>A,T [Show Flanks]
                        Chromosome:
                        6:42963641 (GRCh38)
                        6:42931379 (GRCh37)
                        Canonical SPDI:
                        NC_000006.12:42963640:C:A,NC_000006.12:42963640:C:T
                        Gene:
                        PEX6 (Varview), GNMT (Varview), CNPY3-GNMT (Varview)
                        Functional Consequence:
                        500B_downstream_variant,downstream_transcript_variant,coding_sequence_variant,missense_variant,non_coding_transcript_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        T=0./0 (ALFA)
                        A=0.000008/2 (TOPMED)
                        A=0.000014/2 (GnomAD)
                        HGVS:
                        NC_000006.12:g.42963641C>A, NC_000006.12:g.42963641C>T, NC_000006.11:g.42931379C>A, NC_000006.11:g.42931379C>T, NG_008370.1:g.20603G>T, NG_008370.1:g.20603G>A, NG_008396.1:g.7880C>A, NG_008396.1:g.7880C>T, NM_018960.6:c.823C>A, NM_018960.6:c.823C>T, NM_018960.5:c.823C>A, NM_018960.5:c.823C>T, NM_018960.4:c.823C>A, NM_018960.4:c.823C>T, NM_001318865.2:c.766C>A, NM_001318865.2:c.766C>T, NM_001318865.1:c.766C>A, NM_001318865.1:c.766C>T, NR_134899.2:n.694C>A, NR_134899.2:n.694C>T, NR_134899.1:n.694C>A, NR_134899.1:n.694C>T, NM_001318856.2:c.625C>A, NM_001318856.2:c.625C>T, NM_001318856.1:c.625C>A, NM_001318856.1:c.625C>T, NM_001318857.2:c.640C>A, NM_001318857.2:c.640C>T, NM_001318857.1:c.640C>A, NM_001318857.1:c.640C>T, NR_134892.2:n.716C>A, NR_134892.2:n.716C>T, NR_134892.1:n.1066C>A, NR_134892.1:n.1066C>T, NR_134890.2:n.685C>A, NR_134890.2:n.685C>T, NR_134890.1:n.1035C>A, NR_134890.1:n.1035C>T, NM_001318858.2:c.532C>A, NM_001318858.2:c.532C>T, NM_001318858.1:c.532C>A, NM_001318858.1:c.532C>T, NR_134891.2:n.588C>A, NR_134891.2:n.588C>T, NR_134891.1:n.938C>A, NR_134891.1:n.938C>T, NP_061833.1:p.Pro275Thr, NP_061833.1:p.Pro275Ser, NP_001305794.1:p.Pro256Thr, NP_001305794.1:p.Pro256Ser, NP_001305785.1:p.Pro209Thr, NP_001305785.1:p.Pro209Ser, NP_001305786.1:p.Pro214Thr, NP_001305786.1:p.Pro214Ser, NP_001305787.1:p.Pro178Thr, NP_001305787.1:p.Pro178Ser
                        16.

                        rs1429685802 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          G>A [Show Flanks]
                          Chromosome:
                          6:42963199 (GRCh38)
                          6:42930937 (GRCh37)
                          Canonical SPDI:
                          NC_000006.12:42963198:G:A
                          Gene:
                          GNMT (Varview), CNPY3-GNMT (Varview)
                          Functional Consequence:
                          coding_sequence_variant,intron_variant,synonymous_variant
                          Clinical significance:
                          likely-benign
                          Validated:
                          by frequency,by alfa
                          MAF:
                          A=0./0 (ALFA)
                          A=0.000004/1 (GnomAD_exomes)
                          HGVS:
                          18.

                          rs1426697780 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            A>C [Show Flanks]
                            Chromosome:
                            6:42962283 (GRCh38)
                            6:42930021 (GRCh37)
                            Canonical SPDI:
                            NC_000006.12:42962282:A:C
                            Gene:
                            GNMT (Varview), CNPY3-GNMT (Varview)
                            Functional Consequence:
                            non_coding_transcript_variant,missense_variant,coding_sequence_variant,intron_variant
                            Validated:
                            by frequency,by alfa
                            MAF:
                            C=0./0 (ALFA)
                            HGVS:
                            19.

                            rs1423245690 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>T [Show Flanks]
                              Chromosome:
                              6:42962763 (GRCh38)
                              6:42930501 (GRCh37)
                              Canonical SPDI:
                              NC_000006.12:42962762:C:T
                              Gene:
                              GNMT (Varview), CNPY3-GNMT (Varview)
                              Functional Consequence:
                              non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              T=0./0 (ALFA)
                              T=0.000004/1 (TOPMED)
                              T=0.000014/2 (GnomAD)
                              HGVS:
                              20.

                              rs1421975477 [Homo sapiens]
                                Variant type:
                                DELINS
                                Alleles:
                                ->A [Show Flanks]
                                Chromosome:
                                6:42962254 (GRCh38)
                                6:42929993 (GRCh37)
                                Canonical SPDI:
                                NC_000006.12:42962254:A:AA
                                Gene:
                                GNMT (Varview), CNPY3-GNMT (Varview)
                                Functional Consequence:
                                non_coding_transcript_variant,frameshift_variant,coding_sequence_variant,intron_variant
                                Validated:
                                by frequency,by alfa
                                MAF:
                                AA=0./0 (ALFA)
                                A=0.000004/1 (TOPMED)
                                HGVS:

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