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Links from Protein

Items: 1 to 20 of 2209

1.

rs1488572085 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>T [Show Flanks]
    Chromosome:
    21:45509358 (GRCh38)
    21:46929272 (GRCh37)
    Canonical SPDI:
    NC_000021.9:45509357:C:T
    Gene:
    SLC19A1 (Varview), COL18A1 (Varview)
    Functional Consequence:
    genic_downstream_transcript_variant,coding_sequence_variant,synonymous_variant,intron_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    T=0./0 (ALFA)
    T=0.000007/1 (GnomAD)
    HGVS:
    2.

    rs1488058894 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      21:45505921 (GRCh38)
      21:46925835 (GRCh37)
      Canonical SPDI:
      NC_000021.9:45505920:G:A
      Gene:
      SLC19A1 (Varview), COL18A1 (Varview)
      Functional Consequence:
      genic_downstream_transcript_variant,coding_sequence_variant,synonymous_variant,intron_variant
      Clinical significance:
      likely-benign
      HGVS:
      3.

      rs1485432928 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>T [Show Flanks]
        Chromosome:
        21:45480703 (GRCh38)
        21:46900617 (GRCh37)
        Canonical SPDI:
        NC_000021.9:45480702:C:T
        Gene:
        COL18A1 (Varview)
        Functional Consequence:
        missense_variant,coding_sequence_variant
        Clinical significance:
        uncertain-significance
        Validated:
        by frequency,by alfa
        MAF:
        T=0./0 (ALFA)
        T=0.000004/1 (GnomAD_exomes)
        HGVS:
        4.

        rs1483374805 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          C>- [Show Flanks]
          Chromosome:
          21:45476358 (GRCh38)
          21:46896272 (GRCh37)
          Canonical SPDI:
          NC_000021.9:45476357:CCC:CC
          Gene:
          COL18A1 (Varview), MIR6815 (Varview)
          Functional Consequence:
          stop_gained,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
          Validated:
          by frequency
          MAF:
          -=0.000004/1 (GnomAD_exomes)
          HGVS:
          5.

          rs1482921669 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            T>C [Show Flanks]
            Chromosome:
            21:45477757 (GRCh38)
            21:46897671 (GRCh37)
            Canonical SPDI:
            NC_000021.9:45477756:T:C
            Gene:
            COL18A1 (Varview), MIR6815 (Varview)
            Functional Consequence:
            missense_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
            Validated:
            by frequency,by alfa
            MAF:
            C=0.00005/1 (ALFA)
            HGVS:
            6.

            rs1482505480 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>T [Show Flanks]
              Chromosome:
              21:45468587 (GRCh38)
              21:46888501 (GRCh37)
              Canonical SPDI:
              NC_000021.9:45468586:C:T
              Gene:
              COL18A1 (Varview)
              Functional Consequence:
              missense_variant,coding_sequence_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0./0 (ALFA)
              T=0.000004/1 (TOPMED)
              T=0.000007/1 (GnomAD)
              HGVS:
              7.

              rs1482481003 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>C [Show Flanks]
                Chromosome:
                21:45504437 (GRCh38)
                21:46924351 (GRCh37)
                Canonical SPDI:
                NC_000021.9:45504436:G:C
                Gene:
                SLC19A1 (Varview), COL18A1 (Varview)
                Functional Consequence:
                missense_variant,genic_downstream_transcript_variant,coding_sequence_variant,intron_variant
                Validated:
                by frequency,by alfa
                MAF:
                C=0.000111/1 (ALFA)
                C=0.000004/1 (GnomAD_exomes)
                HGVS:
                8.

                rs1481858986 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A [Show Flanks]
                  Chromosome:
                  21:45492706 (GRCh38)
                  21:46912620 (GRCh37)
                  Canonical SPDI:
                  NC_000021.9:45492705:G:A
                  Gene:
                  COL18A1 (Varview)
                  Functional Consequence:
                  missense_variant,coding_sequence_variant
                  Validated:
                  by frequency
                  MAF:
                  A=0.000004/1 (GnomAD_exomes)
                  HGVS:
                  11.

                  rs1478601531 [Homo sapiens]
                    Variant type:
                    DELINS
                    Alleles:
                    CGGGGCCGACTTCCAGTGCTTCCAGCAGGCGCGGGCCG>- [Show Flanks]
                    Chromosome:
                    21:45510117 (GRCh38)
                    21:46930031 (GRCh37)
                    Canonical SPDI:
                    NC_000021.9:45510113:CCGCGGGGCCGACTTCCAGTGCTTCCAGCAGGCGCGGGCCG:CCG
                    Gene:
                    SLC19A1 (Varview), COL18A1 (Varview)
                    Functional Consequence:
                    genic_downstream_transcript_variant,coding_sequence_variant,frameshift_variant,intron_variant
                    Clinical significance:
                    pathogenic
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    CCG=0./0 (ALFA)
                    -=0.000004/1 (TOPMED)
                    -=0.000007/1 (GnomAD)
                    HGVS:
                    12.

                    rs1478369652 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      A>G [Show Flanks]
                      Chromosome:
                      21:45505276 (GRCh38)
                      21:46925190 (GRCh37)
                      Canonical SPDI:
                      NC_000021.9:45505275:A:G
                      Gene:
                      SLC19A1 (Varview), COL18A1 (Varview)
                      Functional Consequence:
                      missense_variant,genic_downstream_transcript_variant,coding_sequence_variant,intron_variant
                      Clinical significance:
                      uncertain-significance
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      G=0./0 (ALFA)
                      G=0.000004/1 (GnomAD_exomes)
                      G=0.000004/1 (TOPMED)
                      HGVS:
                      13.

                      rs1478337223 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        T>C [Show Flanks]
                        Chromosome:
                        21:45512358 (GRCh38)
                        21:46932272 (GRCh37)
                        Canonical SPDI:
                        NC_000021.9:45512357:T:C
                        Gene:
                        SLC19A1 (Varview), COL18A1 (Varview)
                        Functional Consequence:
                        genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant,downstream_transcript_variant
                        HGVS:
                        14.

                        rs1477453115 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>G [Show Flanks]
                          Chromosome:
                          21:45456015 (GRCh38)
                          21:46875929 (GRCh37)
                          Canonical SPDI:
                          NC_000021.9:45456014:A:G
                          Gene:
                          COL18A1 (Varview)
                          Functional Consequence:
                          missense_variant,coding_sequence_variant,intron_variant
                          Validated:
                          by frequency
                          MAF:
                          G=0.000004/1 (GnomAD_exomes)
                          HGVS:
                          15.

                          rs1477347967 [Homo sapiens]
                            Variant type:
                            DELINS
                            Alleles:
                            C>- [Show Flanks]
                            Chromosome:
                            21:45456105 (GRCh38)
                            21:46876019 (GRCh37)
                            Canonical SPDI:
                            NC_000021.9:45456104:CCCC:CCC
                            Gene:
                            COL18A1 (Varview)
                            Functional Consequence:
                            coding_sequence_variant,frameshift_variant,intron_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            CCC=0./0 (ALFA)
                            -=0.000008/2 (TOPMED)
                            HGVS:
                            16.

                            rs1477203467 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>T [Show Flanks]
                              Chromosome:
                              21:45476404 (GRCh38)
                              21:46896318 (GRCh37)
                              Canonical SPDI:
                              NC_000021.9:45476403:C:T
                              Gene:
                              COL18A1 (Varview), MIR6815 (Varview)
                              Functional Consequence:
                              synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
                              HGVS:
                              18.

                              rs1476485887 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>G [Show Flanks]
                                Chromosome:
                                21:45482023 (GRCh38)
                                21:46901937 (GRCh37)
                                Canonical SPDI:
                                NC_000021.9:45482022:C:G
                                Gene:
                                COL18A1 (Varview)
                                Functional Consequence:
                                missense_variant,coding_sequence_variant
                                Validated:
                                by frequency
                                MAF:
                                G=0.000004/1 (GnomAD_exomes)
                                HGVS:
                                19.

                                rs1475636833 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>G [Show Flanks]
                                  Chromosome:
                                  21:45505424 (GRCh38)
                                  21:46925338 (GRCh37)
                                  Canonical SPDI:
                                  NC_000021.9:45505423:C:G
                                  Gene:
                                  SLC19A1 (Varview), COL18A1 (Varview)
                                  Functional Consequence:
                                  missense_variant,genic_downstream_transcript_variant,coding_sequence_variant,intron_variant
                                  HGVS:
                                  20.

                                  rs1475490590 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    A>C,G [Show Flanks]
                                    Chromosome:
                                    21:45455541 (GRCh38)
                                    21:46875455 (GRCh37)
                                    Canonical SPDI:
                                    NC_000021.9:45455540:A:C,NC_000021.9:45455540:A:G
                                    Gene:
                                    COL18A1 (Varview)
                                    Functional Consequence:
                                    missense_variant,coding_sequence_variant,intron_variant
                                    Clinical significance:
                                    uncertain-significance
                                    Validated:
                                    by frequency,by alfa,by cluster
                                    MAF:
                                    C=0./0 (ALFA)
                                    C=0.000004/1 (TOPMED)
                                    HGVS:

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