Links from Nucleotide
Items: 1 to 20 of 21188
1.
rs1491572442 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ATGT
[Show Flanks]
- Chromosome:
- 11:121178518
(GRCh38)
11:121049228
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121178518:TGT:TGTATGT
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TGTATGT=0./0
(
ALFA)
TGTA=0.00009/1
(GnomAD)
- HGVS:
2.
rs1491516694 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GT
[Show Flanks]
- Chromosome:
- 11:121179975
(GRCh38)
11:121050685
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121179975:T:TGT
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TGT=0./0
(
ALFA)
TG=0.00001/1
(GnomAD)
- HGVS:
3.
rs1491468989 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CT>-
[Show Flanks]
- Chromosome:
- 11:121161542
(GRCh38)
11:121032251
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121161541:CT:
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.0002/1
(1000Genomes)
-=0.0019/8
(GnomAD)
- HGVS:
4.
rs1491424698 has merged into rs368080288 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTT>-,T,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 11:121179985
(GRCh38)
11:121050694
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121179974:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTT=0./0
(
ALFA)
-=0.000008/2
(TOPMED)
T=0.225/9
(GENOME_DK)
- HGVS:
NC_000011.10:g.121179985_121179989del, NC_000011.10:g.121179986_121179989del, NC_000011.10:g.121179988_121179989del, NC_000011.10:g.121179989del, NC_000011.10:g.121179989dup, NC_000011.10:g.121179988_121179989dup, NC_000011.10:g.121179987_121179989dup, NC_000011.10:g.121179986_121179989dup, NC_000011.10:g.121179982_121179989dup, NC_000011.10:g.121179981_121179989dup, NC_000011.10:g.121179977_121179989dup, NC_000011.10:g.121179989_121179990insTTTTTTTTTTTTTTTTTTTTT, NC_000011.10:g.121179989_121179990insTTTTTTTTTTTTTTTTTTTTTT, NC_000011.10:g.121179989_121179990insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.121050694_121050698del, NC_000011.9:g.121050695_121050698del, NC_000011.9:g.121050697_121050698del, NC_000011.9:g.121050698del, NC_000011.9:g.121050698dup, NC_000011.9:g.121050697_121050698dup, NC_000011.9:g.121050696_121050698dup, NC_000011.9:g.121050695_121050698dup, NC_000011.9:g.121050691_121050698dup, NC_000011.9:g.121050690_121050698dup, NC_000011.9:g.121050686_121050698dup, NC_000011.9:g.121050698_121050699insTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.121050698_121050699insTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.121050698_121050699insTTTTTTTTTTTTTTTTTTTTTTTT, NG_011633.1:g.82320_82324del, NG_011633.1:g.82321_82324del, NG_011633.1:g.82323_82324del, NG_011633.1:g.82324del, NG_011633.1:g.82324dup, NG_011633.1:g.82323_82324dup, NG_011633.1:g.82322_82324dup, NG_011633.1:g.82321_82324dup, NG_011633.1:g.82317_82324dup, NG_011633.1:g.82316_82324dup, NG_011633.1:g.82312_82324dup, NG_011633.1:g.82324_82325insTTTTTTTTTTTTTTTTTTTTT, NG_011633.1:g.82324_82325insTTTTTTTTTTTTTTTTTTTTTT, NG_011633.1:g.82324_82325insTTTTTTTTTTTTTTTTTTTTTTTT
5.
rs1491401565 has merged into rs3222565 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TGTGTGTGTGTGTGTGTGTGTGTGTGTG>-,TGTG,TGTGTG,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
[Show Flanks]
- Chromosome:
- 11:121178535
(GRCh38)
11:121049244
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000011.10:121178517:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGTGTGTGTGTGTGTGTG=0./0
(
ALFA)
- HGVS:
NC_000011.10:g.121178519TG[8], NC_000011.10:g.121178519TG[10], NC_000011.10:g.121178519TG[11], NC_000011.10:g.121178519TG[12], NC_000011.10:g.121178519TG[13], NC_000011.10:g.121178519TG[14], NC_000011.10:g.121178519TG[15], NC_000011.10:g.121178519TG[16], NC_000011.10:g.121178519TG[17], NC_000011.10:g.121178519TG[18], NC_000011.10:g.121178519TG[19], NC_000011.10:g.121178519TG[20], NC_000011.10:g.121178519TG[21], NC_000011.10:g.121178519TG[23], NC_000011.10:g.121178519TG[24], NC_000011.10:g.121178519TG[25], NC_000011.10:g.121178519TG[26], NC_000011.10:g.121178519TG[27], NC_000011.10:g.121178519TG[28], NC_000011.10:g.121178519TG[29], NC_000011.10:g.121178519TG[30], NC_000011.10:g.121178519TG[31], NC_000011.10:g.121178519TG[32], NC_000011.10:g.121178519TG[33], NC_000011.10:g.121178519TG[34], NC_000011.9:g.121049228TG[8], NC_000011.9:g.121049228TG[10], NC_000011.9:g.121049228TG[11], NC_000011.9:g.121049228TG[12], NC_000011.9:g.121049228TG[13], NC_000011.9:g.121049228TG[14], NC_000011.9:g.121049228TG[15], NC_000011.9:g.121049228TG[16], NC_000011.9:g.121049228TG[17], NC_000011.9:g.121049228TG[18], NC_000011.9:g.121049228TG[19], NC_000011.9:g.121049228TG[20], NC_000011.9:g.121049228TG[21], NC_000011.9:g.121049228TG[23], NC_000011.9:g.121049228TG[24], NC_000011.9:g.121049228TG[25], NC_000011.9:g.121049228TG[26], NC_000011.9:g.121049228TG[27], NC_000011.9:g.121049228TG[28], NC_000011.9:g.121049228TG[29], NC_000011.9:g.121049228TG[30], NC_000011.9:g.121049228TG[31], NC_000011.9:g.121049228TG[32], NC_000011.9:g.121049228TG[33], NC_000011.9:g.121049228TG[34], NG_011633.1:g.80854TG[8], NG_011633.1:g.80854TG[10], NG_011633.1:g.80854TG[11], NG_011633.1:g.80854TG[12], NG_011633.1:g.80854TG[13], NG_011633.1:g.80854TG[14], NG_011633.1:g.80854TG[15], NG_011633.1:g.80854TG[16], NG_011633.1:g.80854TG[17], NG_011633.1:g.80854TG[18], NG_011633.1:g.80854TG[19], NG_011633.1:g.80854TG[20], NG_011633.1:g.80854TG[21], NG_011633.1:g.80854TG[23], NG_011633.1:g.80854TG[24], NG_011633.1:g.80854TG[25], NG_011633.1:g.80854TG[26], NG_011633.1:g.80854TG[27], NG_011633.1:g.80854TG[28], NG_011633.1:g.80854TG[29], NG_011633.1:g.80854TG[30], NG_011633.1:g.80854TG[31], NG_011633.1:g.80854TG[32], NG_011633.1:g.80854TG[33], NG_011633.1:g.80854TG[34]
6.
rs1491367766 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 11:121178517
(GRCh38)
11:121049226
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121178516:AG:
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.00034/4
(
ALFA)
-=0.00146/82
(GnomAD)
- HGVS:
7.
rs1491366577 has merged into rs34807486 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTT>-,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 11:121180821
(GRCh38)
11:121051530
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:121180813:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.365016/1828
(1000Genomes)
- HGVS:
NC_000011.10:g.121180821_121180831del, NC_000011.10:g.121180823_121180831del, NC_000011.10:g.121180825_121180831del, NC_000011.10:g.121180826_121180831del, NC_000011.10:g.121180827_121180831del, NC_000011.10:g.121180828_121180831del, NC_000011.10:g.121180829_121180831del, NC_000011.10:g.121180830_121180831del, NC_000011.10:g.121180831del, NC_000011.10:g.121180831dup, NC_000011.10:g.121180830_121180831dup, NC_000011.10:g.121180814_121180831T[20]CTTTTTTTTTTTTTTTTTTT[1], NC_000011.10:g.121180829_121180831dup, NC_000011.10:g.121180828_121180831dup, NC_000011.10:g.121180814_121180831T[22]CTTTTTTTTTTTTTTTTTTTT[1], NC_000011.10:g.121180814_121180831T[22]CTTTTTTTTTTTTTTTTTTTTT[1], NC_000011.10:g.121180827_121180831dup, NC_000011.10:g.121180826_121180831dup, NC_000011.10:g.121180821_121180831dup, NC_000011.10:g.121180817_121180831dup, NC_000011.10:g.121180815_121180831dup, NC_000011.9:g.121051530_121051540del, NC_000011.9:g.121051532_121051540del, NC_000011.9:g.121051534_121051540del, NC_000011.9:g.121051535_121051540del, NC_000011.9:g.121051536_121051540del, NC_000011.9:g.121051537_121051540del, NC_000011.9:g.121051538_121051540del, NC_000011.9:g.121051539_121051540del, NC_000011.9:g.121051540del, NC_000011.9:g.121051540dup, NC_000011.9:g.121051539_121051540dup, NC_000011.9:g.121051523_121051540T[20]CTTTTTTTTTTTTTTTTTTT[1], NC_000011.9:g.121051538_121051540dup, NC_000011.9:g.121051537_121051540dup, NC_000011.9:g.121051523_121051540T[22]CTTTTTTTTTTTTTTTTTTTT[1], NC_000011.9:g.121051523_121051540T[22]CTTTTTTTTTTTTTTTTTTTTT[1], NC_000011.9:g.121051536_121051540dup, NC_000011.9:g.121051535_121051540dup, NC_000011.9:g.121051530_121051540dup, NC_000011.9:g.121051526_121051540dup, NC_000011.9:g.121051524_121051540dup, NG_011633.1:g.83156_83166del, NG_011633.1:g.83158_83166del, NG_011633.1:g.83160_83166del, NG_011633.1:g.83161_83166del, NG_011633.1:g.83162_83166del, NG_011633.1:g.83163_83166del, NG_011633.1:g.83164_83166del, NG_011633.1:g.83165_83166del, NG_011633.1:g.83166del, NG_011633.1:g.83166dup, NG_011633.1:g.83165_83166dup, NG_011633.1:g.83149_83166T[20]CTTTTTTTTTTTTTTTTTTT[1], NG_011633.1:g.83164_83166dup, NG_011633.1:g.83163_83166dup, NG_011633.1:g.83149_83166T[22]CTTTTTTTTTTTTTTTTTTTT[1], NG_011633.1:g.83149_83166T[22]CTTTTTTTTTTTTTTTTTTTTT[1], NG_011633.1:g.83162_83166dup, NG_011633.1:g.83161_83166dup, NG_011633.1:g.83156_83166dup, NG_011633.1:g.83152_83166dup, NG_011633.1:g.83150_83166dup
8.
rs1491301385 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CGTGTG,CGTGTGTGTG
[Show Flanks]
- Chromosome:
- 11:121178517
(GRCh38)
11:121049227
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121178517:GTGTG:GTGTGCGTGTG,NC_000011.10:121178517:GTGTG:GTGTGCGTGTGTGTG
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGCGTGTGTGTG=0./0
(
ALFA)
- HGVS:
9.
rs1491298586 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->CCTCCCCTCCCCTCCCCTCCT,CCTCCCCTCCCCTCCT
[Show Flanks]
- Chromosome:
- 11:121161542
(GRCh38)
11:121032252
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121161542::CCTCCCCTCCCCTCCCCTCCT,NC_000011.10:121161542::CCTCCCCTCCCCTCCT
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
CCTCCCCTCCCCTCCT=0.00008/1
(TOMMO)
- HGVS:
10.
rs1491286458 has merged into rs58470847 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAA>-,A,AA,AAA,AAAAA,AAAAAA
[Show Flanks]
- Chromosome:
- 11:121122864
(GRCh38)
11:120993573
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121122852:AAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000011.10:121122852:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000011.10:121122852:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000011.10:121122852:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000011.10:121122852:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000011.10:121122852:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAA=0.0002/1
(
ALFA)
AA=0.2508/1256
(1000Genomes)
- HGVS:
NC_000011.10:g.121122864_121122867del, NC_000011.10:g.121122865_121122867del, NC_000011.10:g.121122866_121122867del, NC_000011.10:g.121122867del, NC_000011.10:g.121122867dup, NC_000011.10:g.121122866_121122867dup, NC_000011.9:g.120993573_120993576del, NC_000011.9:g.120993574_120993576del, NC_000011.9:g.120993575_120993576del, NC_000011.9:g.120993576del, NC_000011.9:g.120993576dup, NC_000011.9:g.120993575_120993576dup, NG_011633.1:g.25199_25202del, NG_011633.1:g.25200_25202del, NG_011633.1:g.25201_25202del, NG_011633.1:g.25202del, NG_011633.1:g.25202dup, NG_011633.1:g.25201_25202dup
11.
rs1491259293 has merged into rs3222344 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 11:121119018
(GRCh38)
11:120989727
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000011.10:121118993:CACACACACACACACACACACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACACACACACACACA
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Clinical significance:
- likely-benign
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACACACACACACACACA=0./0
(
ALFA)
-=0.00014/2
(TOMMO)
- HGVS:
NC_000011.10:g.121118994CA[12], NC_000011.10:g.121118994CA[13], NC_000011.10:g.121118994CA[14], NC_000011.10:g.121118994CA[15], NC_000011.10:g.121118994CA[16], NC_000011.10:g.121118994CA[18], NC_000011.10:g.121118994CA[19], NC_000011.10:g.121118994CA[20], NC_000011.10:g.121118994CA[21], NC_000011.10:g.121118994CA[22], NC_000011.10:g.121118994CA[24], NC_000011.10:g.121118994CA[25], NC_000011.10:g.121118994CA[26], NC_000011.10:g.121118994CA[27], NC_000011.10:g.121118994CA[28], NC_000011.9:g.120989703CA[12], NC_000011.9:g.120989703CA[13], NC_000011.9:g.120989703CA[14], NC_000011.9:g.120989703CA[15], NC_000011.9:g.120989703CA[16], NC_000011.9:g.120989703CA[18], NC_000011.9:g.120989703CA[19], NC_000011.9:g.120989703CA[20], NC_000011.9:g.120989703CA[21], NC_000011.9:g.120989703CA[22], NC_000011.9:g.120989703CA[24], NC_000011.9:g.120989703CA[25], NC_000011.9:g.120989703CA[26], NC_000011.9:g.120989703CA[27], NC_000011.9:g.120989703CA[28], NG_011633.1:g.21329CA[12], NG_011633.1:g.21329CA[13], NG_011633.1:g.21329CA[14], NG_011633.1:g.21329CA[15], NG_011633.1:g.21329CA[16], NG_011633.1:g.21329CA[18], NG_011633.1:g.21329CA[19], NG_011633.1:g.21329CA[20], NG_011633.1:g.21329CA[21], NG_011633.1:g.21329CA[22], NG_011633.1:g.21329CA[24], NG_011633.1:g.21329CA[25], NG_011633.1:g.21329CA[26], NG_011633.1:g.21329CA[27], NG_011633.1:g.21329CA[28]
12.
rs1491199318 has merged into rs33961345 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GC>-,GCGC
[Show Flanks]
- Chromosome:
- 11:121134349
(GRCh38)
11:121005058
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121134347:CGC:C,NC_000011.10:121134347:CGC:CGCGC
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CGCGC=0./0
(
ALFA)
CG=0.000007/1
(GnomAD)
- HGVS:
13.
rs1491155516 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AACACACACACACACA,AACACACATACACACACACACACA
[Show Flanks]
- Chromosome:
- 11:121118994
(GRCh38)
11:120989704
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121118994:ACACACACACACACA:ACACACACACACACAAACACACACACACACA,NC_000011.10:121118994:ACACACACACACACA:ACACACACACACACAAACACACATACACACACACACACA
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACAAACACACATACACACACACACACA=0./0
(
ALFA)
ACACACACACACACAAACACACAT=0.000004/1
(TOPMED)
- HGVS:
15.
rs1491042711 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 11:121122694
(GRCh38)
11:120993403
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121122692:AGA:A
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.1837/2179
(
ALFA)
-=0.02542/15
(NorthernSweden)
-=0.23787/20701
(GnomAD)
-=0.29439/4840
(TOMMO)
- HGVS:
17.
rs1490984920 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 11:121183980
(GRCh38)
11:121054689
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121183979:G:T
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000008/2
(TOPMED)
- HGVS:
18.
rs1490981056 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 11:121128758
(GRCh38)
11:120999467
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121128757:G:C
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
19.
rs1490913298 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 11:121187363
(GRCh38)
11:121058072
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121187362:C:T
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000014/2
(GnomAD)
- HGVS:
20.
rs1490901763 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->CCTGGGAAA
[Show Flanks]
- Chromosome:
- 11:121143814
(GRCh38)
11:121014524
(GRCh37)
- Canonical SPDI:
- NC_000011.10:121143814::CCTGGGAAA
- Gene:
- TECTA (Varview), TBCEL-TECTA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
CCTGGGAAA=0./0
(
ALFA)
CCTGGGAAA=0.000004/1
(TOPMED)
- HGVS: