SNP Links for Gene (Select 96459) - SNP

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Select item 14915880191.

rs1491588019 has merged into rs1375841942 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT [Show Flanks]
Chromosome:: 5:131785075 (GRCh38)
5:131120768 (GRCh37)
Canonical SPDI:: NC_000005.10:131785068:ATATATAT:ATATAT,NC_000005.10:131785068:ATATATAT:ATATATATAT
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATAT=0./0 (ALFA)
-=0.00021/4 (TOMMO)
HGVS:: NC_000005.10:g.131785069AT[3], NC_000005.10:g.131785069AT[5], NC_000005.9:g.131120762AT[3], NC_000005.9:g.131120762AT[5]

Select item 14915567382.

rs1491556738 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 5:131785069 (GRCh38)
5:131120763 (GRCh37)
Canonical SPDI:: NC_000005.10:131785069::C
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00008/1 (ALFA)
C=0.00995/120 (GnomAD)
HGVS:: NC_000005.10:g.131785069_131785070insC, NC_000005.9:g.131120762_131120763insC

Select item 14915539813.

rs1491553981 has merged into rs11292297 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTT>-,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 5:131665908 (GRCh38)
5:131001601 (GRCh37)
Canonical SPDI:: NC_000005.10:131665899:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000005.10:131665899:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000005.10:131665899:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000005.10:131665899:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131665899:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131665899:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT
Gene:: FNIP1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTTTTTTT=0./0 (ALFA)
T=0.03442/19 (NorthernSweden)
HGVS:: NC_000005.10:g.131665908_131665919del, NC_000005.10:g.131665918_131665919del, NC_000005.10:g.131665919del, NC_000005.10:g.131665919dup, NC_000005.10:g.131665918_131665919dup, NC_000005.10:g.131665917_131665919dup, NC_000005.9:g.131001601_131001612del, NC_000005.9:g.131001611_131001612del, NC_000005.9:g.131001612del, NC_000005.9:g.131001612dup, NC_000005.9:g.131001611_131001612dup, NC_000005.9:g.131001610_131001612dup

Select item 14915538564.

rs1491553856 has merged into rs368323566 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTTT [Show Flanks]
Chromosome:: 5:131685464 (GRCh38)
5:131021157 (GRCh37)
Canonical SPDI:: NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:131685448:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.2/8 (GENOME_DK)
-=0.4734/2371 (1000Genomes)
HGVS:: NC_000005.10:g.131685464_131685466del, NC_000005.10:g.131685465_131685466del, NC_000005.10:g.131685466del, NC_000005.10:g.131685466dup, NC_000005.10:g.131685465_131685466dup, NC_000005.10:g.131685464_131685466dup, NC_000005.10:g.131685463_131685466dup, NC_000005.10:g.131685462_131685466dup, NC_000005.10:g.131685461_131685466dup, NC_000005.10:g.131685460_131685466dup, NC_000005.10:g.131685457_131685466dup, NC_000005.9:g.131021157_131021159del, NC_000005.9:g.131021158_131021159del, NC_000005.9:g.131021159del, NC_000005.9:g.131021159dup, NC_000005.9:g.131021158_131021159dup, NC_000005.9:g.131021157_131021159dup, NC_000005.9:g.131021156_131021159dup, NC_000005.9:g.131021155_131021159dup, NC_000005.9:g.131021154_131021159dup, NC_000005.9:g.131021153_131021159dup, NC_000005.9:g.131021150_131021159dup

Select item 14915351575.

rs1491535157 has merged into rs10579529 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: 5:131772431 (GRCh38)
5:131108124 (GRCh37)
Canonical SPDI:: NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000005.10:131772420:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000005.10:g.131772431_131772437del, NC_000005.10:g.131772432_131772437del, NC_000005.10:g.131772433_131772437del, NC_000005.10:g.131772434_131772437del, NC_000005.10:g.131772435_131772437del, NC_000005.10:g.131772436_131772437del, NC_000005.10:g.131772437del, NC_000005.10:g.131772437dup, NC_000005.10:g.131772436_131772437dup, NC_000005.9:g.131108124_131108130del, NC_000005.9:g.131108125_131108130del, NC_000005.9:g.131108126_131108130del, NC_000005.9:g.131108127_131108130del, NC_000005.9:g.131108128_131108130del, NC_000005.9:g.131108129_131108130del, NC_000005.9:g.131108130del, NC_000005.9:g.131108130dup, NC_000005.9:g.131108129_131108130dup

Select item 14915145576.

rs1491514557 has merged into rs1338135774 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT [Show Flanks]
Chromosome:: 5:131785097 (GRCh38)
5:131120790 (GRCh37)
Canonical SPDI:: NC_000005.10:131785090:ATATATAT:ATATAT,NC_000005.10:131785090:ATATATAT:ATATATATAT
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATAT=0./0 (ALFA)
HGVS:: NC_000005.10:g.131785091AT[3], NC_000005.10:g.131785091AT[5], NC_000005.9:g.131120784AT[3], NC_000005.9:g.131120784AT[5]

Select item 14915109227.

rs1491510922 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTA
Chromosome:: no mapping
Canonical SPDI:

Select item 14914888828.

rs1491488882 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 5:131697968 (GRCh38)
5:131033661 (GRCh37)
Canonical SPDI:: NC_000005.10:131697967:CA:
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000005.10:g.131697968_131697969del, NC_000005.9:g.131033661_131033662del

Select item 14914759189.

rs1491475918 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 5:131785029 (GRCh38)
5:131120722 (GRCh37)
Canonical SPDI:: NC_000005.10:131785027:ACA:A
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.00004/1 (TOMMO)
-=0.00165/19 (GnomAD)
HGVS:: NC_000005.10:g.131785029_131785030del, NC_000005.9:g.131120722_131120723del

Select item 149145796110.

rs1491457961 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTTTTTTTTTTTTTTTTTTTTTTG
Chromosome:: no mapping
Canonical SPDI:

Select item 149145322311.

rs1491453223 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C,TATATATATAGTC,TATATATATATATC,TATATATATATC,TATATATATC [Show Flanks]
Chromosome:: 5:131785028 (GRCh38)
5:131120722 (GRCh37)
Canonical SPDI:: NC_000005.10:131785028:C:CC,NC_000005.10:131785028:C:CTATATATATAGTC,NC_000005.10:131785028:C:CTATATATATATATC,NC_000005.10:131785028:C:CTATATATATATC,NC_000005.10:131785028:C:CTATATATATC
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CTATATATATAGTC=0./0 (ALFA)
CTATATATAT=0.00102/12 (GnomAD)
HGVS:: NC_000005.10:g.131785029dup, NC_000005.10:g.131785029_131785030insTATATATATAGTC, NC_000005.10:g.131785029_131785030insTATATATATATATC, NC_000005.10:g.131785029_131785030insTATATATATATC, NC_000005.10:g.131785029_131785030insTATATATATC, NC_000005.9:g.131120722dup, NC_000005.9:g.131120722_131120723insTATATATATAGTC, NC_000005.9:g.131120722_131120723insTATATATATATATC, NC_000005.9:g.131120722_131120723insTATATATATATC, NC_000005.9:g.131120722_131120723insTATATATATC

Select item 149140923512.

rs1491409235 has merged into rs70974007 [Homo sapiens]

Variant type:: DELINS
Alleles:: TATATATATATATATATATA>-,TA,TATA,TATATA,TATATATA,TATATATATA,TATATATATATA,TATATATATATATA,TATATATATATATATA,TATATATATATATATATA,TATATATATATATATATATATA,TATATATATATATATATATATATA,TATATATATATATATATATATATATA,TATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA [Show Flanks]
Chromosome:: 5:131693343 (GRCh38)
5:131029036 (GRCh37)
Canonical SPDI:: NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000005.10:131693333:ATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATA=0./0 (ALFA)
HGVS:: NC_000005.10:g.131693335TA[4], NC_000005.10:g.131693335TA[5], NC_000005.10:g.131693335TA[6], NC_000005.10:g.131693335TA[7], NC_000005.10:g.131693335TA[8], NC_000005.10:g.131693335TA[9], NC_000005.10:g.131693335TA[10], NC_000005.10:g.131693335TA[11], NC_000005.10:g.131693335TA[12], NC_000005.10:g.131693335TA[13], NC_000005.10:g.131693335TA[15], NC_000005.10:g.131693335TA[16], NC_000005.10:g.131693335TA[17], NC_000005.10:g.131693335TA[18], NC_000005.10:g.131693335TA[19], NC_000005.10:g.131693335TA[20], NC_000005.10:g.131693335TA[21], NC_000005.10:g.131693335TA[22], NC_000005.10:g.131693335TA[23], NC_000005.10:g.131693335TA[25], NC_000005.10:g.131693335TA[26], NC_000005.10:g.131693335TA[28], NC_000005.10:g.131693335TA[33], NC_000005.9:g.131029028TA[4], NC_000005.9:g.131029028TA[5], NC_000005.9:g.131029028TA[6], NC_000005.9:g.131029028TA[7], NC_000005.9:g.131029028TA[8], NC_000005.9:g.131029028TA[9], NC_000005.9:g.131029028TA[10], NC_000005.9:g.131029028TA[11], NC_000005.9:g.131029028TA[12], NC_000005.9:g.131029028TA[13], NC_000005.9:g.131029028TA[15], NC_000005.9:g.131029028TA[16], NC_000005.9:g.131029028TA[17], NC_000005.9:g.131029028TA[18], NC_000005.9:g.131029028TA[19], NC_000005.9:g.131029028TA[20], NC_000005.9:g.131029028TA[21], NC_000005.9:g.131029028TA[22], NC_000005.9:g.131029028TA[23], NC_000005.9:g.131029028TA[25], NC_000005.9:g.131029028TA[26], NC_000005.9:g.131029028TA[28], NC_000005.9:g.131029028TA[33]

Select item 149140328413.

rs1491403284 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 5:131662757 (GRCh38)
5:130998450 (GRCh37)
Canonical SPDI:: NC_000005.10:131662756:TG:
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.01467/174 (ALFA)
-=0.00067/64 (GnomAD)
-=0.00584/165 (TOMMO)
HGVS:: NC_000005.10:g.131662757_131662758del, NC_000005.9:g.130998450_130998451del

Select item 149137776114.

rs1491377761 has merged into rs1449142035 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT [Show Flanks]
Chromosome:: 5:131785120 (GRCh38)
5:131120813 (GRCh37)
Canonical SPDI:: NC_000005.10:131785113:ATATATAT:ATATAT,NC_000005.10:131785113:ATATATAT:ATATATATAT
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATAT=0./0 (ALFA)
-=0.0001/1 (GnomAD)
HGVS:: NC_000005.10:g.131785114AT[3], NC_000005.10:g.131785114AT[5], NC_000005.9:g.131120807AT[3], NC_000005.9:g.131120807AT[5]

Select item 149137286115.

rs1491372861 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 5:131785091 (GRCh38)
5:131120785 (GRCh37)
Canonical SPDI:: NC_000005.10:131785091::C
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000005.10:g.131785091_131785092insC, NC_000005.9:g.131120784_131120785insC

Select item 149136978016.

rs1491369780 has merged into rs60617618 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,AAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 5:131794239 (GRCh38)
5:131129932 (GRCh37)
Canonical SPDI:: NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:131794229:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000005.10:g.131794239_131794254del, NC_000005.10:g.131794242_131794254del, NC_000005.10:g.131794244_131794254del, NC_000005.10:g.131794246_131794254del, NC_000005.10:g.131794247_131794254del, NC_000005.10:g.131794248_131794254del, NC_000005.10:g.131794249_131794254del, NC_000005.10:g.131794250_131794254del, NC_000005.10:g.131794251_131794254del, NC_000005.10:g.131794252_131794254del, NC_000005.10:g.131794253_131794254del, NC_000005.10:g.131794254del, NC_000005.10:g.131794254dup, NC_000005.10:g.131794253_131794254dup, NC_000005.10:g.131794252_131794254dup, NC_000005.10:g.131794251_131794254dup, NC_000005.10:g.131794250_131794254dup, NC_000005.10:g.131794249_131794254dup, NC_000005.10:g.131794247_131794254dup, NC_000005.10:g.131794242_131794254dup, NC_000005.10:g.131794254_131794255insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000005.10:g.131794230_131794254A[29]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000005.9:g.131129932_131129947del, NC_000005.9:g.131129935_131129947del, NC_000005.9:g.131129937_131129947del, NC_000005.9:g.131129939_131129947del, NC_000005.9:g.131129940_131129947del, NC_000005.9:g.131129941_131129947del, NC_000005.9:g.131129942_131129947del, NC_000005.9:g.131129943_131129947del, NC_000005.9:g.131129944_131129947del, NC_000005.9:g.131129945_131129947del, NC_000005.9:g.131129946_131129947del, NC_000005.9:g.131129947del, NC_000005.9:g.131129947dup, NC_000005.9:g.131129946_131129947dup, NC_000005.9:g.131129945_131129947dup, NC_000005.9:g.131129944_131129947dup, NC_000005.9:g.131129943_131129947dup, NC_000005.9:g.131129942_131129947dup, NC_000005.9:g.131129940_131129947dup, NC_000005.9:g.131129935_131129947dup, NC_000005.9:g.131129947_131129948insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000005.9:g.131129923_131129947A[29]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 149135810017.

rs1491358100 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->T
Chromosome:: no mapping
Canonical SPDI:

Select item 149133632918.

rs1491336329 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT [Show Flanks]
Chromosome:: 5:131661218 (GRCh38)
5:130996912 (GRCh37)
Canonical SPDI:: NC_000005.10:131661218:T:TGT,NC_000005.10:131661218:T:TGTGT,NC_000005.10:131661218:T:TGTGTGT,NC_000005.10:131661218:T:TGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000005.10:131661218:T:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TGTGT=0./0 (ALFA)
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.131661219_131661220insGT, NC_000005.10:g.131661219_131661220insGTGT, NC_000005.10:g.131661220GT[3], NC_000005.10:g.131661220GT[4], NC_000005.10:g.131661220GT[5], NC_000005.10:g.131661220GT[6], NC_000005.10:g.131661220GT[7], NC_000005.10:g.131661220GT[8], NC_000005.10:g.131661220GT[9], NC_000005.10:g.131661220GT[10], NC_000005.10:g.131661220GT[11], NC_000005.10:g.131661220GT[12], NC_000005.10:g.131661220GT[13], NC_000005.10:g.131661220GT[15], NC_000005.9:g.130996912_130996913insGT, NC_000005.9:g.130996912_130996913insGTGT, NC_000005.9:g.130996913GT[3], NC_000005.9:g.130996913GT[4], NC_000005.9:g.130996913GT[5], NC_000005.9:g.130996913GT[6], NC_000005.9:g.130996913GT[7], NC_000005.9:g.130996913GT[8], NC_000005.9:g.130996913GT[9], NC_000005.9:g.130996913GT[10], NC_000005.9:g.130996913GT[11], NC_000005.9:g.130996913GT[12], NC_000005.9:g.130996913GT[13], NC_000005.9:g.130996913GT[15]

Select item 149132649419.

rs1491326494 has merged into rs34731837 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT [Show Flanks]
Chromosome:: 5:131661220 (GRCh38)
5:130996913 (GRCh37)
Canonical SPDI:: NC_000005.10:131661217:TTTT:TT,NC_000005.10:131661217:TTTT:TTT,NC_000005.10:131661217:TTTT:TTTTT,NC_000005.10:131661217:TTTT:TTTTTT
Gene:: FNIP1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTT=0./0 (ALFA)
-=0.00431/2 (NorthernSweden)
-=0.00761/118 (TOMMO)
-=0.01559/27 (Korea1K)
TT=0.20541/205 (GoNL)
HGVS:: NC_000005.10:g.131661220_131661221del, NC_000005.10:g.131661221del, NC_000005.10:g.131661221dup, NC_000005.10:g.131661220_131661221dup, NC_000005.9:g.130996913_130996914del, NC_000005.9:g.130996914del, NC_000005.9:g.130996914dup, NC_000005.9:g.130996913_130996914dup

Select item 149130742320.

rs1491307423 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 5:131665899 (GRCh38)
5:131001592 (GRCh37)
Canonical SPDI:: NC_000005.10:131665898:CT:
Gene:: FNIP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.007081/84 (ALFA)
-=0.009041/953 (GnomAD)
HGVS:: NC_000005.10:g.131665899_131665900del, NC_000005.9:g.131001592_131001593del

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