Links from Gene
Items: 1 to 20 of 2252
1.
rs1491076755 has merged into rs3049036 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 3:49418504
(GRCh38)
3:49455937
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:49418494:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
NC_000003.12:g.49418504_49418518del, NC_000003.12:g.49418505_49418518del, NC_000003.12:g.49418506_49418518del, NC_000003.12:g.49418507_49418518del, NC_000003.12:g.49418508_49418518del, NC_000003.12:g.49418509_49418518del, NC_000003.12:g.49418510_49418518del, NC_000003.12:g.49418511_49418518del, NC_000003.12:g.49418512_49418518del, NC_000003.12:g.49418513_49418518del, NC_000003.12:g.49418514_49418518del, NC_000003.12:g.49418515_49418518del, NC_000003.12:g.49418516_49418518del, NC_000003.12:g.49418517_49418518del, NC_000003.12:g.49418518del, NC_000003.12:g.49418518dup, NC_000003.12:g.49418517_49418518dup, NC_000003.12:g.49418516_49418518dup, NC_000003.12:g.49418515_49418518dup, NC_000003.12:g.49418514_49418518dup, NC_000003.12:g.49418513_49418518dup, NC_000003.12:g.49418512_49418518dup, NC_000003.12:g.49418511_49418518dup, NC_000003.12:g.49418510_49418518dup, NC_000003.12:g.49418509_49418518dup, NC_000003.12:g.49418508_49418518dup, NC_000003.12:g.49418507_49418518dup, NC_000003.12:g.49418506_49418518dup, NC_000003.12:g.49418505_49418518dup, NC_000003.12:g.49418518_49418519insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.49455937_49455951del, NC_000003.11:g.49455938_49455951del, NC_000003.11:g.49455939_49455951del, NC_000003.11:g.49455940_49455951del, NC_000003.11:g.49455941_49455951del, NC_000003.11:g.49455942_49455951del, NC_000003.11:g.49455943_49455951del, NC_000003.11:g.49455944_49455951del, NC_000003.11:g.49455945_49455951del, NC_000003.11:g.49455946_49455951del, NC_000003.11:g.49455947_49455951del, NC_000003.11:g.49455948_49455951del, NC_000003.11:g.49455949_49455951del, NC_000003.11:g.49455950_49455951del, NC_000003.11:g.49455951del, NC_000003.11:g.49455951dup, NC_000003.11:g.49455950_49455951dup, NC_000003.11:g.49455949_49455951dup, NC_000003.11:g.49455948_49455951dup, NC_000003.11:g.49455947_49455951dup, NC_000003.11:g.49455946_49455951dup, NC_000003.11:g.49455945_49455951dup, NC_000003.11:g.49455944_49455951dup, NC_000003.11:g.49455943_49455951dup, NC_000003.11:g.49455942_49455951dup, NC_000003.11:g.49455941_49455951dup, NC_000003.11:g.49455940_49455951dup, NC_000003.11:g.49455939_49455951dup, NC_000003.11:g.49455938_49455951dup, NC_000003.11:g.49455951_49455952insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_015986.1:g.9170_9184del, NG_015986.1:g.9171_9184del, NG_015986.1:g.9172_9184del, NG_015986.1:g.9173_9184del, NG_015986.1:g.9174_9184del, NG_015986.1:g.9175_9184del, NG_015986.1:g.9176_9184del, NG_015986.1:g.9177_9184del, NG_015986.1:g.9178_9184del, NG_015986.1:g.9179_9184del, NG_015986.1:g.9180_9184del, NG_015986.1:g.9181_9184del, NG_015986.1:g.9182_9184del, NG_015986.1:g.9183_9184del, NG_015986.1:g.9184del, NG_015986.1:g.9184dup, NG_015986.1:g.9183_9184dup, NG_015986.1:g.9182_9184dup, NG_015986.1:g.9181_9184dup, NG_015986.1:g.9180_9184dup, NG_015986.1:g.9179_9184dup, NG_015986.1:g.9178_9184dup, NG_015986.1:g.9177_9184dup, NG_015986.1:g.9176_9184dup, NG_015986.1:g.9175_9184dup, NG_015986.1:g.9174_9184dup, NG_015986.1:g.9173_9184dup, NG_015986.1:g.9172_9184dup, NG_015986.1:g.9171_9184dup, NG_015986.1:g.9184_9185insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
2.
rs1490693241 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:49416447
(GRCh38)
3:49453880
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49416446:A:G
- Gene:
- AMT (Varview), TCTA (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
4.
rs1490451340 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:49418088
(GRCh38)
3:49455521
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49418087:C:T
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000224/1
(
ALFA)
T=0.000014/2
(GnomAD)
T=0.000223/1
(Estonian)
- HGVS:
5.
rs1490121045 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GTT>-
[Show Flanks]
- Chromosome:
- 3:49419924
(GRCh38)
3:49457357
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49419923:GTT:
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.000071/1
(
ALFA)
-=0.000014/2
(GnomAD)
-=0.000038/10
(TOPMED)
- HGVS:
6.
rs1489956984 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:49418726
(GRCh38)
3:49456159
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49418725:T:C
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000132/2
(
ALFA)
C=0.000015/2
(GnomAD)
C=0.000446/2
(Estonian)
C=0.000531/9
(TOMMO)
- HGVS:
7.
rs1489892184 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:49418128
(GRCh38)
3:49455561
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49418127:A:G
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
G=0.000008/2
(TOPMED)
G=0.000035/1
(TOMMO)
- HGVS:
8.
rs1489778356 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 3:49423369
(GRCh38)
3:49460802
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49423368:C:G
- Gene:
- AMT (Varview), NICN1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
9.
rs1489152600 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:49417549
(GRCh38)
3:49454982
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49417548:G:A
- Gene:
- AMT (Varview)
- Functional Consequence:
- coding_sequence_variant,non_coding_transcript_variant,intron_variant,synonymous_variant
- Clinical significance:
- likely-benign
- Validated:
- by frequency,by alfa
- MAF:
A=0.000111/1
(
ALFA)
A=0.000004/1
(GnomAD_exomes)
- HGVS:
NC_000003.12:g.49417549G>A, NC_000003.11:g.49454982G>A, NG_015986.1:g.10130C>T, NM_000481.4:c.1203C>T, NM_000481.3:c.1203C>T, NR_028435.2:n.1212C>T, NR_028435.1:n.1417C>T, NM_001164710.2:c.1071C>T, NM_001164710.1:c.1071C>T, NM_001164711.2:c.1035C>T, NM_001164711.1:c.1035C>T
10.
rs1489093299 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:49423483
(GRCh38)
3:49460916
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49423482:G:A
- Gene:
- AMT (Varview), NICN1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.00003/8
(TOPMED)
A=0.000057/8
(GnomAD)
A=0.00006/1
(TOMMO)
A=0.000156/1
(1000Genomes)
- HGVS:
11.
rs1488357513 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CTTT>-
[Show Flanks]
- Chromosome:
- 3:49418494
(GRCh38)
3:49455927
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49418490:TTTCTTT:TTT
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TTT=0./0
(
ALFA)
-=0.00006/4
(GnomAD)
- HGVS:
12.
rs1487986234 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:49417878
(GRCh38)
3:49455311
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49417877:A:G
- Gene:
- AMT (Varview)
- Functional Consequence:
- coding_sequence_variant,missense_variant,non_coding_transcript_variant
- Validated:
- by frequency
- MAF:
G=0.000004/1
(GnomAD_exomes)
- HGVS:
NC_000003.12:g.49417878A>G, NC_000003.11:g.49455311A>G, NG_015986.1:g.9801T>C, NM_000481.4:c.973T>C, NM_000481.3:c.973T>C, NR_028435.2:n.982T>C, NR_028435.1:n.1187T>C, NM_001164710.2:c.841T>C, NM_001164710.1:c.841T>C, NM_001164711.2:c.805T>C, NM_001164711.1:c.805T>C, NM_001164712.2:c.973T>C, NM_001164712.1:c.973T>C, NP_000472.2:p.Cys325Arg, NP_001158182.1:p.Cys281Arg, NP_001158183.1:p.Cys269Arg, NP_001158184.1:p.Cys325Arg
13.
rs1487811717 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 3:49420232
(GRCh38)
3:49457665
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49420231:C:G
- Gene:
- AMT (Varview)
- Functional Consequence:
- coding_sequence_variant,non_coding_transcript_variant,intron_variant,missense_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
NC_000003.12:g.49420232C>G, NC_000003.11:g.49457665C>G, NG_015986.1:g.7447G>C, NM_000481.4:c.450G>C, NM_000481.3:c.450G>C, NR_028435.2:n.459G>C, NR_028435.1:n.664G>C, NM_001164711.2:c.282G>C, NM_001164711.1:c.282G>C, NM_001164712.2:c.450G>C, NM_001164712.1:c.450G>C, NP_000472.2:p.Glu150Asp, NP_001158183.1:p.Glu94Asp, NP_001158184.1:p.Glu150Asp
14.
rs1486684330 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:49421607
(GRCh38)
3:49459040
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49421606:A:G
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(GnomAD_exomes)
G=0.000008/2
(TOPMED)
- HGVS:
15.
rs1486489337 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:49424343
(GRCh38)
3:49461776
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49424342:C:T
- Gene:
- AMT (Varview), NICN1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
16.
rs1486479023 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- 3:49423221
(GRCh38)
3:49460654
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49423220:A:G,NC_000003.12:49423220:A:T
- Gene:
- AMT (Varview), NICN1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
- HGVS:
17.
rs1486173267 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 3:49420722
(GRCh38)
3:49458155
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49420721:G:C
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000011/3
(TOPMED)
- HGVS:
18.
rs1485738422 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:49422054
(GRCh38)
3:49459487
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49422053:A:G
- Gene:
- AMT (Varview), NICN1 (Varview)
- Functional Consequence:
- intron_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency
- MAF:
G=0.000004/1
(GnomAD_exomes)
- HGVS:
19.
rs1485270149 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 3:49422268
(GRCh38)
3:49459701
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49422267:C:G,NC_000003.12:49422267:C:T
- Gene:
- AMT (Varview), NICN1 (Varview)
- Functional Consequence:
- coding_sequence_variant,intron_variant,downstream_transcript_variant,missense_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.000004/1
(GnomAD_exomes)
T=0.000004/1
(TOPMED)
- HGVS:
NC_000003.12:g.49422268C>G, NC_000003.12:g.49422268C>T, NC_000003.11:g.49459701C>G, NC_000003.11:g.49459701C>T, NG_033046.1:g.12057G>C, NG_033046.1:g.12057G>A, NG_015986.1:g.5411G>C, NG_015986.1:g.5411G>A, NM_000481.4:c.94G>C, NM_000481.4:c.94G>A, NM_000481.3:c.94G>C, NM_000481.3:c.94G>A, NM_001164710.2:c.94G>C, NM_001164710.2:c.94G>A, NM_001164710.1:c.94G>C, NM_001164710.1:c.94G>A, NM_001164712.2:c.94G>C, NM_001164712.2:c.94G>A, NM_001164712.1:c.94G>C, NM_001164712.1:c.94G>A, NP_000472.2:p.Val32Leu, NP_000472.2:p.Val32Met, NP_001158182.1:p.Val32Leu, NP_001158182.1:p.Val32Met, NP_001158184.1:p.Val32Leu, NP_001158184.1:p.Val32Met
20.
rs1484764128 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 3:49417779
(GRCh38)
3:49455212
(GRCh37)
- Canonical SPDI:
- NC_000003.12:49417778:G:C
- Gene:
- AMT (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(GnomAD_exomes)
C=0.000008/2
(TOPMED)
- HGVS: