SNP Links for Gene (Select 199899) - SNP

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Select item 14915856741.

rs1491585674 has merged into rs879295094 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGAAAGAGAGAGA,GAGAGA,GAGAGAGA,GAGAGAGAAAGAGA,GAGAGAGAGA,GAGAGAGAGAGAGA [Show Flanks]
Chromosome:: 1:63177427 (GRCh38)
1:63643098 (GRCh37)
Canonical SPDI:: NC_000001.11:63177425:AGA:A,NC_000001.11:63177425:AGA:AGAGAAAGAGAGAGA,NC_000001.11:63177425:AGA:AGAGAGA,NC_000001.11:63177425:AGA:AGAGAGAGA,NC_000001.11:63177425:AGA:AGAGAGAGAAAGAGA,NC_000001.11:63177425:AGA:AGAGAGAGAGA,NC_000001.11:63177425:AGA:AGAGAGAGAGAGAGA
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGAGA=0./0 (ALFA)
AGAG=0.000004/1 (TOPMED)
AGAG=0.000094/1 (TOMMO)
HGVS:: NC_000001.11:g.63177427_63177428del, NC_000001.11:g.63177426_63177428AG[2]AAAGAGAGAGA[1], NC_000001.11:g.63177427GA[3], NC_000001.11:g.63177427GA[4], NC_000001.11:g.63177426_63177428AG[4]AAAGAGA[1], NC_000001.11:g.63177427GA[5], NC_000001.11:g.63177427GA[7], NC_000001.10:g.63643098_63643099del, NC_000001.10:g.63643097_63643099AG[2]AAAGAGAGAGA[1], NC_000001.10:g.63643098GA[3], NC_000001.10:g.63643098GA[4], NC_000001.10:g.63643097_63643099AG[4]AAAGAGA[1], NC_000001.10:g.63643098GA[5], NC_000001.10:g.63643098GA[7]

Select item 14915821432.

rs1491582143 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:63184205 (GRCh38)
1:63649877 (GRCh37)
Canonical SPDI:: NC_000001.11:63184205:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAA
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.63184206_63184222A[17]CAAAAAAAAAAAAAAAAA[1], NC_000001.10:g.63649877_63649893A[17]CAAAAAAAAAAAAAAAAA[1]

Select item 14915757993.

rs1491575799 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: 1:63201799 (GRCh38)
1:63667470 (GRCh37)
Canonical SPDI:: NC_000001.11:63201798:AA:
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.63201799_63201800del, NC_000001.10:g.63667470_63667471del

Select item 14915714694.

rs1491571469 has merged into rs5774644 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,AA,AAA,AAAA,AAAAAA,AAAAAAA [Show Flanks]
Chromosome:: 1:63254884 (GRCh38)
1:63720555 (GRCh37)
Canonical SPDI:: NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
-=0.4447/1714 (ALSPAC)
-=0.4788/1708 (1000Genomes)
HGVS:: NC_000001.11:g.63254884_63254888del, NC_000001.11:g.63254886_63254888del, NC_000001.11:g.63254887_63254888del, NC_000001.11:g.63254888del, NC_000001.11:g.63254888dup, NC_000001.11:g.63254887_63254888dup, NC_000001.10:g.63720555_63720559del, NC_000001.10:g.63720557_63720559del, NC_000001.10:g.63720558_63720559del, NC_000001.10:g.63720559del, NC_000001.10:g.63720559dup, NC_000001.10:g.63720558_63720559dup

Select item 14915646355.

rs1491564635 has merged into rs71045884 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:63184219 (GRCh38)
1:63649890 (GRCh37)
Canonical SPDI:: NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63184204:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.63184219_63184225del, NC_000001.11:g.63184220_63184225del, NC_000001.11:g.63184221_63184225del, NC_000001.11:g.63184222_63184225del, NC_000001.11:g.63184223_63184225del, NC_000001.11:g.63184224_63184225del, NC_000001.11:g.63184225del, NC_000001.11:g.63184225dup, NC_000001.11:g.63184224_63184225dup, NC_000001.11:g.63184223_63184225dup, NC_000001.11:g.63184222_63184225dup, NC_000001.11:g.63184221_63184225dup, NC_000001.11:g.63184220_63184225dup, NC_000001.11:g.63184219_63184225dup, NC_000001.11:g.63184217_63184225dup, NC_000001.11:g.63184216_63184225dup, NC_000001.11:g.63184214_63184225dup, NC_000001.11:g.63184212_63184225dup, NC_000001.11:g.63184209_63184225dup, NC_000001.11:g.63184208_63184225dup, NC_000001.11:g.63184225_63184226insAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.63184225_63184226insAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.63184225_63184226insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.63184225_63184226insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.63184225_63184226insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.63184225_63184226insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.63184205_63184225A[52]TAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000001.11:g.63184205_63184225A[25]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000001.11:g.63184205_63184225A[22]CAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000001.10:g.63649890_63649896del, NC_000001.10:g.63649891_63649896del, NC_000001.10:g.63649892_63649896del, NC_000001.10:g.63649893_63649896del, NC_000001.10:g.63649894_63649896del, NC_000001.10:g.63649895_63649896del, NC_000001.10:g.63649896del, NC_000001.10:g.63649896dup, NC_000001.10:g.63649895_63649896dup, NC_000001.10:g.63649894_63649896dup, NC_000001.10:g.63649893_63649896dup, NC_000001.10:g.63649892_63649896dup, NC_000001.10:g.63649891_63649896dup, NC_000001.10:g.63649890_63649896dup, NC_000001.10:g.63649888_63649896dup, NC_000001.10:g.63649887_63649896dup, NC_000001.10:g.63649885_63649896dup, NC_000001.10:g.63649883_63649896dup, NC_000001.10:g.63649880_63649896dup, NC_000001.10:g.63649879_63649896dup, NC_000001.10:g.63649896_63649897insAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.63649896_63649897insAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.63649896_63649897insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.63649896_63649897insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.63649896_63649897insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.63649896_63649897insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.63649876_63649896A[52]TAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000001.10:g.63649876_63649896A[25]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000001.10:g.63649876_63649896A[22]CAAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 14915604776.

rs1491560477 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 1:63227299 (GRCh38)
1:63692970 (GRCh37)
Canonical SPDI:: NC_000001.11:63227297:TCT:T
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00042/5 (ALFA)
-=0.00045/45 (GnomAD)
-=0.00057/9 (TOMMO)
TC=0.001/1 (GoNL)
-=0.04785/87 (Korea1K)
HGVS:: NC_000001.11:g.63227299_63227300del, NC_000001.10:g.63692970_63692971del

Select item 14915528247.

rs1491552824 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:63177430 (GRCh38)
1:63643102 (GRCh37)
Canonical SPDI:: NC_000001.11:63177430:G:GG
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.000016/2 (GnomAD)
HGVS:: NC_000001.11:g.63177431dup, NC_000001.10:g.63643102dup

Select item 14915513398.

rs1491551339 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AAAAAAAAAATAAAAATTAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:63220556 (GRCh38)
1:63686228 (GRCh37)
Canonical SPDI:: NC_000001.11:63220556:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAATTAAAAAAAAAAAAAAAAAAA
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.63220557_63220575A[29]TAAAAATTAAAAAAAAAAAAAAAAAAA[1], NC_000001.10:g.63686228_63686246A[29]TAAAAATTAAAAAAAAAAAAAAAAAAA[1]

Select item 14915148809.

rs1491514880 has merged into rs34884316 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT [Show Flanks]
Chromosome:: 1:63258927 (GRCh38)
1:63724598 (GRCh37)
Canonical SPDI:: NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:63258914:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTT=0./0 (ALFA)
-=0.082/316 (ALSPAC)
HGVS:: NC_000001.11:g.63258927_63258931del, NC_000001.11:g.63258928_63258931del, NC_000001.11:g.63258929_63258931del, NC_000001.11:g.63258930_63258931del, NC_000001.11:g.63258931del, NC_000001.11:g.63258931dup, NC_000001.11:g.63258930_63258931dup, NC_000001.11:g.63258929_63258931dup, NC_000001.10:g.63724598_63724602del, NC_000001.10:g.63724599_63724602del, NC_000001.10:g.63724600_63724602del, NC_000001.10:g.63724601_63724602del, NC_000001.10:g.63724602del, NC_000001.10:g.63724602dup, NC_000001.10:g.63724601_63724602dup, NC_000001.10:g.63724600_63724602dup

Select item 149151116010.

rs1491511160 [Homo sapiens]

Variant type:: SNV:
Alleles:: >
Chromosome:: no mapping
Canonical SPDI:

Select item 149150612511.

rs1491506125 has merged into rs10712579 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:63163640 (GRCh38)
1:63629311 (GRCh37)
Canonical SPDI:: NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:63163625:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0./0 (ALFA)
AA=0.4159/2083 (1000Genomes)
HGVS:: NC_000001.11:g.63163640_63163643del, NC_000001.11:g.63163641_63163643del, NC_000001.11:g.63163642_63163643del, NC_000001.11:g.63163643del, NC_000001.11:g.63163643dup, NC_000001.11:g.63163642_63163643dup, NC_000001.11:g.63163641_63163643dup, NC_000001.11:g.63163638_63163643dup, NC_000001.11:g.63163636_63163643dup, NC_000001.10:g.63629311_63629314del, NC_000001.10:g.63629312_63629314del, NC_000001.10:g.63629313_63629314del, NC_000001.10:g.63629314del, NC_000001.10:g.63629314dup, NC_000001.10:g.63629313_63629314dup, NC_000001.10:g.63629312_63629314dup, NC_000001.10:g.63629309_63629314dup, NC_000001.10:g.63629307_63629314dup

Select item 149147864612.

rs1491478646 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGA,GAGAGA,GAGAGAGAGA,GAGAGAGAGAGA,GAGAGAGAGAGAGA,GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGA [Show Flanks]
Chromosome:: 1:63177435 (GRCh38)
1:63643106 (GRCh37)
Canonical SPDI:: NC_000001.11:63177433:AGA:A,NC_000001.11:63177433:AGA:AGAGA,NC_000001.11:63177433:AGA:AGAGAGA,NC_000001.11:63177433:AGA:AGAGAGAGAGA,NC_000001.11:63177433:AGA:AGAGAGAGAGAGA,NC_000001.11:63177433:AGA:AGAGAGAGAGAGAGA,NC_000001.11:63177433:AGA:AGAGAGAGAGAGAGAGA,NC_000001.11:63177433:AGA:AGAGAGAGAGAGAGAGAGA
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGA=0./0 (ALFA)
AG=0.000004/1 (TOPMED)
AGAGAGAGAGAG=0.005/3 (NorthernSweden)
HGVS:: NC_000001.11:g.63177435_63177436del, NC_000001.11:g.63177435_63177436dup, NC_000001.11:g.63177435GA[3], NC_000001.11:g.63177435GA[5], NC_000001.11:g.63177435GA[6], NC_000001.11:g.63177435GA[7], NC_000001.11:g.63177435GA[8], NC_000001.11:g.63177435GA[9], NC_000001.10:g.63643106_63643107del, NC_000001.10:g.63643106_63643107dup, NC_000001.10:g.63643106GA[3], NC_000001.10:g.63643106GA[5], NC_000001.10:g.63643106GA[6], NC_000001.10:g.63643106GA[7], NC_000001.10:g.63643106GA[8], NC_000001.10:g.63643106GA[9]

Select item 149144391113.

rs1491443911 has merged into rs1470401097 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA [Show Flanks]
Chromosome:: 1:63177417 (GRCh38)
1:63643088 (GRCh37)
Canonical SPDI:: NC_000001.11:63177415:AAA:A,NC_000001.11:63177415:AAA:AA,NC_000001.11:63177415:AAA:AAAA
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.63177417_63177418del, NC_000001.11:g.63177418del, NC_000001.11:g.63177418dup, NC_000001.10:g.63643088_63643089del, NC_000001.10:g.63643089del, NC_000001.10:g.63643089dup

Select item 149143919414.

rs1491439194 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGAGA [Show Flanks]
Chromosome:: 1:63177407 (GRCh38)
1:63643078 (GRCh37)
Canonical SPDI:: NC_000001.11:63177405:AGA:A,NC_000001.11:63177405:AGA:AGAGAGA
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
AGAG=0.000019/2 (GnomAD)
HGVS:: NC_000001.11:g.63177407_63177408del, NC_000001.11:g.63177407GA[3], NC_000001.10:g.63643078_63643079del, NC_000001.10:g.63643078GA[3]

Select item 149143514115.

rs1491435141 has merged into rs748327778 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTT>-,T,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 1:63284338 (GRCh38)
1:63750009 (GRCh37)
Canonical SPDI:: NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:63284327:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTT=0./0 (ALFA)
-=0.000098/26 (TOPMED)
-=0.078947/3 (GENOME_DK)
HGVS:: NC_000001.11:g.63284338_63284352del, NC_000001.11:g.63284339_63284352del, NC_000001.11:g.63284341_63284352del, NC_000001.11:g.63284342_63284352del, NC_000001.11:g.63284343_63284352del, NC_000001.11:g.63284344_63284352del, NC_000001.11:g.63284345_63284352del, NC_000001.11:g.63284346_63284352del, NC_000001.11:g.63284347_63284352del, NC_000001.11:g.63284348_63284352del, NC_000001.11:g.63284349_63284352del, NC_000001.11:g.63284350_63284352del, NC_000001.11:g.63284351_63284352del, NC_000001.11:g.63284352del, NC_000001.11:g.63284352dup, NC_000001.11:g.63284351_63284352dup, NC_000001.11:g.63284350_63284352dup, NC_000001.11:g.63284349_63284352dup, NC_000001.11:g.63284348_63284352dup, NC_000001.11:g.63284347_63284352dup, NC_000001.11:g.63284346_63284352dup, NC_000001.11:g.63284345_63284352dup, NC_000001.11:g.63284344_63284352dup, NC_000001.11:g.63284343_63284352dup, NC_000001.11:g.63284342_63284352dup, NC_000001.11:g.63284341_63284352dup, NC_000001.11:g.63284340_63284352dup, NC_000001.11:g.63284339_63284352dup, NC_000001.11:g.63284338_63284352dup, NC_000001.11:g.63284337_63284352dup, NC_000001.11:g.63284336_63284352dup, NC_000001.11:g.63284335_63284352dup, NC_000001.11:g.63284334_63284352dup, NC_000001.11:g.63284333_63284352dup, NC_000001.11:g.63284332_63284352dup, NC_000001.11:g.63284331_63284352dup, NC_000001.11:g.63284330_63284352dup, NC_000001.11:g.63284329_63284352dup, NC_000001.11:g.63284328_63284352dup, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.63284352_63284353insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750009_63750023del, NC_000001.10:g.63750010_63750023del, NC_000001.10:g.63750012_63750023del, NC_000001.10:g.63750013_63750023del, NC_000001.10:g.63750014_63750023del, NC_000001.10:g.63750015_63750023del, NC_000001.10:g.63750016_63750023del, NC_000001.10:g.63750017_63750023del, NC_000001.10:g.63750018_63750023del, NC_000001.10:g.63750019_63750023del, NC_000001.10:g.63750020_63750023del, NC_000001.10:g.63750021_63750023del, NC_000001.10:g.63750022_63750023del, NC_000001.10:g.63750023del, NC_000001.10:g.63750023dup, NC_000001.10:g.63750022_63750023dup, NC_000001.10:g.63750021_63750023dup, NC_000001.10:g.63750020_63750023dup, NC_000001.10:g.63750019_63750023dup, NC_000001.10:g.63750018_63750023dup, NC_000001.10:g.63750017_63750023dup, NC_000001.10:g.63750016_63750023dup, NC_000001.10:g.63750015_63750023dup, NC_000001.10:g.63750014_63750023dup, NC_000001.10:g.63750013_63750023dup, NC_000001.10:g.63750012_63750023dup, NC_000001.10:g.63750011_63750023dup, NC_000001.10:g.63750010_63750023dup, NC_000001.10:g.63750009_63750023dup, NC_000001.10:g.63750008_63750023dup, NC_000001.10:g.63750007_63750023dup, NC_000001.10:g.63750006_63750023dup, NC_000001.10:g.63750005_63750023dup, NC_000001.10:g.63750004_63750023dup, NC_000001.10:g.63750003_63750023dup, NC_000001.10:g.63750002_63750023dup, NC_000001.10:g.63750001_63750023dup, NC_000001.10:g.63750000_63750023dup, NC_000001.10:g.63749999_63750023dup, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.63750023_63750024insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149141582316.

rs1491415823 [Homo sapiens]

Variant type:: INS
Alleles:: ->GCCTGGGCG [Show Flanks]
Chromosome:: 1:63283749 (GRCh38)
1:63749421 (GRCh37)
Canonical SPDI:: NC_000001.11:63283749::GCCTGGGCG
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: GCCTGGGCG=0.00008/5 (GnomAD)
HGVS:: NC_000001.11:g.63283749_63283750insGCCTGGGCG, NC_000001.10:g.63749420_63749421insGCCTGGGCG

Select item 149141467717.

rs1491414677 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 1:63254873 (GRCh38)
1:63720544 (GRCh37)
Canonical SPDI:: NC_000001.11:63254872:TA:
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.00003/3 (GnomAD)
HGVS:: NC_000001.11:g.63254873_63254874del, NC_000001.10:g.63720544_63720545del

Select item 149140282018.

rs1491402820 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:63177462 (GRCh38)
1:63643134 (GRCh37)
Canonical SPDI:: NC_000001.11:63177462::G
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: G=0.000081/2 (TOMMO)
G=0.000966/99 (GnomAD)
HGVS:: NC_000001.11:g.63177462_63177463insG, NC_000001.10:g.63643133_63643134insG

Select item 149140241619.

rs1491402416 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 1:63284352 (GRCh38)
1:63750023 (GRCh37)
Canonical SPDI:: NC_000001.11:63284351:TG:
Gene:: LINC00466 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00312/37 (ALFA)
-=0.00446/73 (TOMMO)
HGVS:: NC_000001.11:g.63284352_63284353del, NC_000001.10:g.63750023_63750024del

Select item 149139525320.

rs1491395253 has merged into rs142879345 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT [Show Flanks]
Chromosome:: 1:63187085 (GRCh38)
1:63652756 (GRCh37)
Canonical SPDI:: NC_000001.11:63187076:TTTTTTTTTT:TTTTTTTT,NC_000001.11:63187076:TTTTTTTTTT:TTTTTTTTT,NC_000001.11:63187076:TTTTTTTTTT:TTTTTTTTTTT
Gene:: LINC00466 (Varview), LOC105378770 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTT=0./0 (ALFA)
-=0.21877/1096 (1000Genomes)
-=0.28/168 (NorthernSweden)
-=0.30436/1173 (ALSPAC)
-=0.30906/1146 (TWINSUK)
-=0.35/14 (GENOME_DK)
-=0.43487/434 (GoNL)
HGVS:: NC_000001.11:g.63187085_63187086del, NC_000001.11:g.63187086del, NC_000001.11:g.63187086dup, NC_000001.10:g.63652756_63652757del, NC_000001.10:g.63652757del, NC_000001.10:g.63652757dup

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