Name: rs5774644
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5774644

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:63254874-63254888 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₅ / delAAA / delAA / delA / …
del(A)₅ / delAAA / delAA / delA / dupA / dupAA
Variation Type: Indel Insertion and Deletion
Frequency: delAA=0.3042 (2035/6689, ALFA)
delAA=0.4447 (1714/3854, ALSPAC)
delAA=0.4788 (1708/3567, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC00466 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	6689	AAAAAAAAAAAAAAA=0.5771	AAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.3042, AAAAAAAAAAAAAA=0.1187, AAAAAAAAAAAAAAAA=0.0000	0.541857	0.177321	0.280822	32
European	Sub	5565	AAAAAAAAAAAAAAA=0.4927	AAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.3653, AAAAAAAAAAAAAA=0.1420, AAAAAAAAAAAAAAAA=0.0000	0.41856	0.22523	0.356211	32
African	Sub	894	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	48	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African American	Sub	846	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	16	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	16	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	0	AAAAAAAAAAAAAAA=0	AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAA=0	0	0	0	N/A
Latin American 1	Sub	32	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	86	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	2	AAAAAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Other	Sub	94	AAAAAAAAAAAAAAA=0.94	AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.02, AAAAAAAAAAAAAA=0.04, AAAAAAAAAAAAAAAA=0.00	0.977273	0.0	0.022727	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	6689	(A)₁₅=0.5771	del(A)₅=0.0000, delAAA=0.0000, delAA=0.3042, delA=0.1187, dupA=0.0000
Allele Frequency Aggregator	European	Sub	5565	(A)₁₅=0.4927	del(A)₅=0.0000, delAAA=0.0000, delAA=0.3653, delA=0.1420, dupA=0.0000
Allele Frequency Aggregator	African	Sub	894	(A)₁₅=1.000	del(A)₅=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000
Allele Frequency Aggregator	Other	Sub	94	(A)₁₅=0.94	del(A)₅=0.00, delAAA=0.00, delAA=0.02, delA=0.04, dupA=0.00
Allele Frequency Aggregator	Latin American 2	Sub	86	(A)₁₅=1.00	del(A)₅=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00
Allele Frequency Aggregator	Latin American 1	Sub	32	(A)₁₅=1.00	del(A)₅=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00
Allele Frequency Aggregator	Asian	Sub	16	(A)₁₅=1.00	del(A)₅=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00
Allele Frequency Aggregator	South Asian	Sub	2	(A)₁₅=1.0	del(A)₅=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(A)₁₅=0.5553	delAA=0.4447
1000Genomes	Global	Study-wide	3567	(A)₁₅=0.5212	delAA=0.4788
1000Genomes	African	Sub	971	(A)₁₅=0.744	delAA=0.256
1000Genomes	Europe	Sub	795	(A)₁₅=0.455	delAA=0.545
1000Genomes	East Asian	Sub	693	(A)₁₅=0.443	delAA=0.557
1000Genomes	South Asian	Sub	561	(A)₁₅=0.365	delAA=0.635
1000Genomes	American	Sub	547	(A)₁₅=0.481	delAA=0.519

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.63254884_63254888del
GRCh38.p14 chr 1	NC_000001.11:g.63254886_63254888del
GRCh38.p14 chr 1	NC_000001.11:g.63254887_63254888del
GRCh38.p14 chr 1	NC_000001.11:g.63254888del
GRCh38.p14 chr 1	NC_000001.11:g.63254888dup
GRCh38.p14 chr 1	NC_000001.11:g.63254887_63254888dup
GRCh37.p13 chr 1	NC_000001.10:g.63720555_63720559del
GRCh37.p13 chr 1	NC_000001.10:g.63720557_63720559del
GRCh37.p13 chr 1	NC_000001.10:g.63720558_63720559del
GRCh37.p13 chr 1	NC_000001.10:g.63720559del
GRCh37.p13 chr 1	NC_000001.10:g.63720559dup
GRCh37.p13 chr 1	NC_000001.10:g.63720558_63720559dup

Gene: LINC00466, long intergenic non-protein coding RNA 466 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC00466 transcript	NR_038252.3:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₅=	del(A)₅	delAAA	delAA	delA	dupA	dupAA
GRCh38.p14 chr 1	NC_000001.11:g.63254874_63254888=	NC_000001.11:g.63254884_63254888del	NC_000001.11:g.63254886_63254888del	NC_000001.11:g.63254887_63254888del	NC_000001.11:g.63254888del	NC_000001.11:g.63254888dup	NC_000001.11:g.63254887_63254888dup
GRCh37.p13 chr 1	NC_000001.10:g.63720545_63720559=	NC_000001.10:g.63720555_63720559del	NC_000001.10:g.63720557_63720559del	NC_000001.10:g.63720558_63720559del	NC_000001.10:g.63720559del	NC_000001.10:g.63720559dup	NC_000001.10:g.63720558_63720559dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

60 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss41121188	Mar 15, 2016 (147)
2	HGSV	ss81132726	Sep 08, 2015 (146)
3	HUMANGENOME_JCVI	ss95231175	Mar 15, 2016 (147)
4	BUSHMAN	ss193105982	Mar 15, 2016 (147)
5	GMI	ss287988014	May 31, 2013 (142)
6	GMI	ss287988016	May 04, 2012 (137)
7	PJP	ss294582281	Aug 21, 2014 (142)
8	PJP	ss294582282	May 31, 2013 (138)
9	BILGI_BIOE	ss666093796	Apr 25, 2013 (138)
10	1000GENOMES	ss1367716674	Aug 21, 2014 (142)
11	1000GENOMES	ss1367716675	Aug 21, 2014 (142)
12	DDI	ss1536230347	Apr 01, 2015 (144)
13	EVA_UK10K_ALSPAC	ss1700719398	Apr 01, 2015 (144)
14	EVA_UK10K_TWINSUK	ss1700719486	Apr 01, 2015 (144)
15	EVA_UK10K_TWINSUK	ss1709929047	Apr 01, 2015 (144)
16	EVA_UK10K_ALSPAC	ss1709929115	Apr 01, 2015 (144)
17	SWEGEN	ss2986910300	Nov 08, 2017 (151)
18	BEROUKHIMLAB	ss3644060002	Oct 11, 2018 (152)
19	BIOINF_KMB_FNS_UNIBA	ss3645046094	Oct 11, 2018 (152)
20	URBANLAB	ss3646675333	Oct 11, 2018 (152)
21	EVA_DECODE	ss3686885864	Jul 12, 2019 (153)
22	EVA_DECODE	ss3686885865	Jul 12, 2019 (153)
23	EVA_DECODE	ss3686885866	Jul 12, 2019 (153)
24	EVA_DECODE	ss3686885867	Jul 12, 2019 (153)
25	ACPOP	ss3727098118	Jul 12, 2019 (153)
26	ACPOP	ss3727098119	Jul 12, 2019 (153)
27	ACPOP	ss3727098120	Jul 12, 2019 (153)
28	PACBIO	ss3783425271	Jul 12, 2019 (153)
29	PACBIO	ss3789081003	Jul 12, 2019 (153)
30	PACBIO	ss3793953746	Jul 12, 2019 (153)
31	KHV_HUMAN_GENOMES	ss3799284548	Jul 12, 2019 (153)
32	KHV_HUMAN_GENOMES	ss3799284549	Jul 12, 2019 (153)
33	EVA	ss3826201682	Apr 25, 2020 (154)
34	EVA	ss3836488240	Apr 25, 2020 (154)
35	EVA	ss3841894607	Apr 25, 2020 (154)
36	KOGIC	ss3944626198	Apr 25, 2020 (154)
37	KOGIC	ss3944626199	Apr 25, 2020 (154)
38	KOGIC	ss3944626200	Apr 25, 2020 (154)
39	GNOMAD	ss3994657911	Apr 25, 2021 (155)
40	GNOMAD	ss3994657912	Apr 25, 2021 (155)
41	GNOMAD	ss3994657913	Apr 25, 2021 (155)
42	GNOMAD	ss3994657914	Apr 25, 2021 (155)
43	GNOMAD	ss3994657915	Apr 25, 2021 (155)
44	GNOMAD	ss3994657916	Apr 25, 2021 (155)
45	TOMMO_GENOMICS	ss5144210104	Apr 25, 2021 (155)
46	TOMMO_GENOMICS	ss5144210105	Apr 25, 2021 (155)
47	TOMMO_GENOMICS	ss5144210106	Apr 25, 2021 (155)
48	1000G_HIGH_COVERAGE	ss5242472308	Oct 12, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5242472309	Oct 12, 2022 (156)
50	1000G_HIGH_COVERAGE	ss5242472310	Oct 12, 2022 (156)
51	HUGCELL_USP	ss5443513981	Oct 12, 2022 (156)
52	HUGCELL_USP	ss5443513982	Oct 12, 2022 (156)
53	HUGCELL_USP	ss5443513983	Oct 12, 2022 (156)
54	TOMMO_GENOMICS	ss5669056195	Oct 12, 2022 (156)
55	TOMMO_GENOMICS	ss5669056196	Oct 12, 2022 (156)
56	TOMMO_GENOMICS	ss5669056197	Oct 12, 2022 (156)
57	TOMMO_GENOMICS	ss5669056198	Oct 12, 2022 (156)
58	EVA	ss5832038328	Oct 12, 2022 (156)
59	EVA	ss5832038329	Oct 12, 2022 (156)
60	EVA	ss5832038330	Oct 12, 2022 (156)
61	1000Genomes	NC_000001.10 - 63720545	Oct 11, 2018 (152)
62	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 63720545	Oct 11, 2018 (152)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 13062152 (NC_000001.11:63254873::A 508/136868) Row 13062153 (NC_000001.11:63254873::AA 1/136904) Row 13062154 (NC_000001.11:63254873:A: 27180/136692)...	-	Apr 25, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 13062152 (NC_000001.11:63254873::A 508/136868) Row 13062153 (NC_000001.11:63254873::AA 1/136904) Row 13062154 (NC_000001.11:63254873:A: 27180/136692)...	-	Apr 25, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 13062152 (NC_000001.11:63254873::A 508/136868) Row 13062153 (NC_000001.11:63254873::AA 1/136904) Row 13062154 (NC_000001.11:63254873:A: 27180/136692)...	-	Apr 25, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 13062152 (NC_000001.11:63254873::A 508/136868) Row 13062153 (NC_000001.11:63254873::AA 1/136904) Row 13062154 (NC_000001.11:63254873:A: 27180/136692)...	-	Apr 25, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 13062152 (NC_000001.11:63254873::A 508/136868) Row 13062153 (NC_000001.11:63254873::AA 1/136904) Row 13062154 (NC_000001.11:63254873:A: 27180/136692)...	-	Apr 25, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 13062152 (NC_000001.11:63254873::A 508/136868) Row 13062153 (NC_000001.11:63254873::AA 1/136904) Row 13062154 (NC_000001.11:63254873:A: 27180/136692)...	-	Apr 25, 2021 (155)
69	Korean Genome Project Submission ignored due to conflicting rows: Row 1004199 (NC_000001.11:63254874:A: 634/1832) Row 1004200 (NC_000001.11:63254873:AA: 729/1832) Row 1004201 (NC_000001.11:63254875::A 7/1832)	-	Apr 25, 2020 (154)
70	Korean Genome Project Submission ignored due to conflicting rows: Row 1004199 (NC_000001.11:63254874:A: 634/1832) Row 1004200 (NC_000001.11:63254873:AA: 729/1832) Row 1004201 (NC_000001.11:63254875::A 7/1832)	-	Apr 25, 2020 (154)
71	Korean Genome Project Submission ignored due to conflicting rows: Row 1004199 (NC_000001.11:63254874:A: 634/1832) Row 1004200 (NC_000001.11:63254873:AA: 729/1832) Row 1004201 (NC_000001.11:63254875::A 7/1832)	-	Apr 25, 2020 (154)
72	Northern Sweden Submission ignored due to conflicting rows: Row 382983 (NC_000001.10:63720544:AA: 269/600) Row 382984 (NC_000001.10:63720544:A: 103/600) Row 382985 (NC_000001.10:63720544:AAA: 4/600)	-	Jul 12, 2019 (153)
73	Northern Sweden Submission ignored due to conflicting rows: Row 382983 (NC_000001.10:63720544:AA: 269/600) Row 382984 (NC_000001.10:63720544:A: 103/600) Row 382985 (NC_000001.10:63720544:AAA: 4/600)	-	Jul 12, 2019 (153)
74	Northern Sweden Submission ignored due to conflicting rows: Row 382983 (NC_000001.10:63720544:AA: 269/600) Row 382984 (NC_000001.10:63720544:A: 103/600) Row 382985 (NC_000001.10:63720544:AAA: 4/600)	-	Jul 12, 2019 (153)
75	8.3KJPN Submission ignored due to conflicting rows: Row 2179411 (NC_000001.10:63720544:AA: 7015/16758) Row 2179412 (NC_000001.10:63720544:A: 5606/16758) Row 2179413 (NC_000001.10:63720544::A 2/16758)	-	Apr 25, 2021 (155)
76	8.3KJPN Submission ignored due to conflicting rows: Row 2179411 (NC_000001.10:63720544:AA: 7015/16758) Row 2179412 (NC_000001.10:63720544:A: 5606/16758) Row 2179413 (NC_000001.10:63720544::A 2/16758)	-	Apr 25, 2021 (155)
77	8.3KJPN Submission ignored due to conflicting rows: Row 2179411 (NC_000001.10:63720544:AA: 7015/16758) Row 2179412 (NC_000001.10:63720544:A: 5606/16758) Row 2179413 (NC_000001.10:63720544::A 2/16758)	-	Apr 25, 2021 (155)
78	14KJPN Submission ignored due to conflicting rows: Row 2893299 (NC_000001.11:63254873:AA: 11903/28258) Row 2893300 (NC_000001.11:63254873:A: 9417/28258) Row 2893301 (NC_000001.11:63254873:AAA: 4/28258)...	-	Oct 12, 2022 (156)
79	14KJPN Submission ignored due to conflicting rows: Row 2893299 (NC_000001.11:63254873:AA: 11903/28258) Row 2893300 (NC_000001.11:63254873:A: 9417/28258) Row 2893301 (NC_000001.11:63254873:AAA: 4/28258)...	-	Oct 12, 2022 (156)
80	14KJPN Submission ignored due to conflicting rows: Row 2893299 (NC_000001.11:63254873:AA: 11903/28258) Row 2893300 (NC_000001.11:63254873:A: 9417/28258) Row 2893301 (NC_000001.11:63254873:AAA: 4/28258)...	-	Oct 12, 2022 (156)
81	14KJPN Submission ignored due to conflicting rows: Row 2893299 (NC_000001.11:63254873:AA: 11903/28258) Row 2893300 (NC_000001.11:63254873:A: 9417/28258) Row 2893301 (NC_000001.11:63254873:AAA: 4/28258)...	-	Oct 12, 2022 (156)
82	UK 10K study - Twins Submission ignored due to conflicting rows: Row 1012804 (NC_000001.10:63720545:A: 737/3708) Row 1012805 (NC_000001.10:63720544:AA: 1668/3708)	-	Apr 25, 2020 (154)
83	UK 10K study - Twins	-	Oct 11, 2018 (152)
84	ALFA	NC_000001.11 - 63254874	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs386354001	Aug 21, 2014 (142)
rs67398476	Oct 04, 2011 (135)
rs67398477	Feb 27, 2009 (130)
rs72226734	Jul 30, 2012 (137)
rs200543319	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3994657916	NC_000001.11:63254873:AAAAA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
8910155725	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss3727098120, ss5832038329	NC_000001.10:63720544:AAA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3686885867, ss3994657915, ss5669056197	NC_000001.11:63254873:AAA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
8910155725	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss287988014, ss294582281	NC_000001.9:63493132:AA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss294582282	NC_000001.9:63493145:AA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
1852836, 1012805, ss666093796, ss1367716674, ss1536230347, ss1700719398, ss1700719486, ss2986910300, ss3644060002, ss3727098118, ss3826201682, ss3836488240, ss5144210104, ss5832038328	NC_000001.10:63720544:AA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3645046094, ss3646675333, ss3799284549, ss3841894607, ss3944626199, ss3994657914, ss5242472308, ss5443513981, ss5669056195	NC_000001.11:63254873:AA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
8910155725	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3686885866	NC_000001.11:63254874:AA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss193105982	NT_032977.9:33692462:AA:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss81132726	NC_000001.8:63432579:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss287988016	NC_000001.9:63493132:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3727098119, ss3783425271, ss3789081003, ss3793953746, ss5144210105, ss5832038330	NC_000001.10:63720544:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss1367716675, ss1709929047, ss1709929115	NC_000001.10:63720545:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3994657913, ss5242472309, ss5443513982, ss5669056196	NC_000001.11:63254873:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
8910155725	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3799284548, ss3944626198	NC_000001.11:63254874:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3686885865	NC_000001.11:63254875:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss41121188, ss95231175	NT_032977.9:33692476:A:	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss5144210106	NC_000001.10:63720544::A	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3994657911, ss5242472310, ss5443513983, ss5669056198	NC_000001.11:63254873::A	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
8910155725	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3944626200	NC_000001.11:63254875::A	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3686885864	NC_000001.11:63254876::A	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss95231175	NT_032977.9:33692476:A:AA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3994657912	NC_000001.11:63254873::AA	NC_000001.11:63254873:AAAAAAAAAAAA… NC_000001.11:63254873:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5774644

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs5774644