Links from Gene
Items: 1 to 20 of 1000
1.
rs1491495631 has merged into rs112126446 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 1:160323004
(GRCh38)
1:160292794
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:160322989:CACACACACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACACACACACACACACA
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACACACA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
NC_000001.11:g.160322990CA[7], NC_000001.11:g.160322990CA[8], NC_000001.11:g.160322990CA[9], NC_000001.11:g.160322990CA[10], NC_000001.11:g.160322990CA[11], NC_000001.11:g.160322990CA[12], NC_000001.11:g.160322990CA[13], NC_000001.11:g.160322990CA[15], NC_000001.11:g.160322990CA[16], NC_000001.11:g.160322990CA[17], NC_000001.11:g.160322990CA[18], NC_000001.11:g.160322990CA[19], NC_000001.11:g.160322990CA[20], NC_000001.11:g.160322990CA[21], NC_000001.11:g.160322990CA[25], NC_000001.10:g.160292780CA[7], NC_000001.10:g.160292780CA[8], NC_000001.10:g.160292780CA[9], NC_000001.10:g.160292780CA[10], NC_000001.10:g.160292780CA[11], NC_000001.10:g.160292780CA[12], NC_000001.10:g.160292780CA[13], NC_000001.10:g.160292780CA[15], NC_000001.10:g.160292780CA[16], NC_000001.10:g.160292780CA[17], NC_000001.10:g.160292780CA[18], NC_000001.10:g.160292780CA[19], NC_000001.10:g.160292780CA[20], NC_000001.10:g.160292780CA[21], NC_000001.10:g.160292780CA[25], NG_050927.1:g.25548TG[7], NG_050927.1:g.25548TG[8], NG_050927.1:g.25548TG[9], NG_050927.1:g.25548TG[10], NG_050927.1:g.25548TG[11], NG_050927.1:g.25548TG[12], NG_050927.1:g.25548TG[13], NG_050927.1:g.25548TG[15], NG_050927.1:g.25548TG[16], NG_050927.1:g.25548TG[17], NG_050927.1:g.25548TG[18], NG_050927.1:g.25548TG[19], NG_050927.1:g.25548TG[20], NG_050927.1:g.25548TG[21], NG_050927.1:g.25548TG[25]
2.
rs1491464967 has merged into rs10714948 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 1:160309752
(GRCh38)
1:160279542
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:160309742:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
-=0.2567/154
(NorthernSweden)
-=0.4/16
(GENOME_DK)
- HGVS:
NC_000001.11:g.160309752_160309758del, NC_000001.11:g.160309754_160309758del, NC_000001.11:g.160309755_160309758del, NC_000001.11:g.160309756_160309758del, NC_000001.11:g.160309757_160309758del, NC_000001.11:g.160309758del, NC_000001.11:g.160309758dup, NC_000001.11:g.160309757_160309758dup, NC_000001.11:g.160309753_160309758dup, NC_000001.11:g.160309749_160309758dup, NC_000001.10:g.160279542_160279548del, NC_000001.10:g.160279544_160279548del, NC_000001.10:g.160279545_160279548del, NC_000001.10:g.160279546_160279548del, NC_000001.10:g.160279547_160279548del, NC_000001.10:g.160279548del, NC_000001.10:g.160279548dup, NC_000001.10:g.160279547_160279548dup, NC_000001.10:g.160279543_160279548dup, NC_000001.10:g.160279539_160279548dup, NG_050927.1:g.38816_38822del, NG_050927.1:g.38818_38822del, NG_050927.1:g.38819_38822del, NG_050927.1:g.38820_38822del, NG_050927.1:g.38821_38822del, NG_050927.1:g.38822del, NG_050927.1:g.38822dup, NG_050927.1:g.38821_38822dup, NG_050927.1:g.38817_38822dup, NG_050927.1:g.38813_38822dup
3.
rs1491421126 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CT>-
[Show Flanks]
- Chromosome:
- 1:160304023
(GRCh38)
1:160273813
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160304021:TCT:T
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
- HGVS:
4.
rs1491341058 has merged into rs10562824 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAA>-,A,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 1:160335895
(GRCh38)
1:160305685
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:160335883:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAA=0./0
(
ALFA)
AAAAAAAAAAAA=0./0
(GENOME_DK)
- HGVS:
NC_000001.11:g.160335895_160335906del, NC_000001.11:g.160335896_160335906del, NC_000001.11:g.160335899_160335906del, NC_000001.11:g.160335901_160335906del, NC_000001.11:g.160335902_160335906del, NC_000001.11:g.160335903_160335906del, NC_000001.11:g.160335904_160335906del, NC_000001.11:g.160335905_160335906del, NC_000001.11:g.160335906del, NC_000001.11:g.160335906dup, NC_000001.11:g.160335905_160335906dup, NC_000001.11:g.160335904_160335906dup, NC_000001.11:g.160335903_160335906dup, NC_000001.11:g.160335902_160335906dup, NC_000001.11:g.160335901_160335906dup, NC_000001.11:g.160335900_160335906dup, NC_000001.11:g.160335899_160335906dup, NC_000001.10:g.160305685_160305696del, NC_000001.10:g.160305686_160305696del, NC_000001.10:g.160305689_160305696del, NC_000001.10:g.160305691_160305696del, NC_000001.10:g.160305692_160305696del, NC_000001.10:g.160305693_160305696del, NC_000001.10:g.160305694_160305696del, NC_000001.10:g.160305695_160305696del, NC_000001.10:g.160305696del, NC_000001.10:g.160305696dup, NC_000001.10:g.160305695_160305696dup, NC_000001.10:g.160305694_160305696dup, NC_000001.10:g.160305693_160305696dup, NC_000001.10:g.160305692_160305696dup, NC_000001.10:g.160305691_160305696dup, NC_000001.10:g.160305690_160305696dup, NC_000001.10:g.160305689_160305696dup, NG_050927.1:g.12670_12681del, NG_050927.1:g.12671_12681del, NG_050927.1:g.12674_12681del, NG_050927.1:g.12676_12681del, NG_050927.1:g.12677_12681del, NG_050927.1:g.12678_12681del, NG_050927.1:g.12679_12681del, NG_050927.1:g.12680_12681del, NG_050927.1:g.12681del, NG_050927.1:g.12681dup, NG_050927.1:g.12680_12681dup, NG_050927.1:g.12679_12681dup, NG_050927.1:g.12678_12681dup, NG_050927.1:g.12677_12681dup, NG_050927.1:g.12676_12681dup, NG_050927.1:g.12675_12681dup, NG_050927.1:g.12674_12681dup
7.
rs1491293706 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AC>-
[Show Flanks]
- Chromosome:
- 1:160293783
(GRCh38)
1:160263573
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160293781:CAC:C
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0./0
(TWINSUK)
-=0.0003/1
(ALSPAC)
- HGVS:
9.
rs1491148485 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->C
[Show Flanks]
- Chromosome:
- 1:160304022
(GRCh38)
1:160273813
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160304022:C:CC
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CC=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
10.
rs1491106235 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GTT
[Show Flanks]
- Chromosome:
- 1:160343955
(GRCh38)
1:160313746
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160343955:TT:TTGTT
- Gene:
- COPA (Varview), NCSTN (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
TTGTT=0.00008/1
(
ALFA)
TTG=0.00039/7
(GnomAD)
- HGVS:
11.
rs1491003915 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:160337462
(GRCh38)
1:160307252
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160337461:G:A
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000142/2
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000021/3
(GnomAD)
- HGVS:
12.
rs1491000309 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- C>-
[Show Flanks]
- Chromosome:
- 1:160294141
(GRCh38)
1:160263931
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160294140:C:
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
-=0.000021/3
(GnomAD)
- HGVS:
14.
rs1490933773 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:160292762
(GRCh38)
1:160262552
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160292761:T:C
- Gene:
- COPA (Varview), LOC107985219 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000019/5
(TOPMED)
C=0.000021/3
(GnomAD)
- HGVS:
15.
rs1490907370 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:160307194
(GRCh38)
1:160276984
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160307193:T:C
- Gene:
- COPA (Varview)
- Functional Consequence:
- missense_variant,coding_sequence_variant
- Validated:
- by frequency
- MAF:
C=0.000008/2
(GnomAD_exomes)
- HGVS:
16.
rs1490888176 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 1:160301967
(GRCh38)
1:160271757
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160301966:A:C
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
17.
rs1490882090 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,G
[Show Flanks]
- Chromosome:
- 1:160313974
(GRCh38)
1:160283764
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160313973:C:A,NC_000001.11:160313973:C:G
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Clinical significance:
- likely-benign
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000071/1
(
ALFA)
A=0.000008/2
(GnomAD_exomes)
G=0.000011/3
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
18.
rs1490854887 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:160326603
(GRCh38)
1:160296393
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160326602:G:A
- Gene:
- COPA (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
- HGVS:
20.
rs1490781441 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 1:160343753
(GRCh38)
1:160313543
(GRCh37)
- Canonical SPDI:
- NC_000001.11:160343752:C:G
- Gene:
- COPA (Varview), NCSTN (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS: