Links from Gene
Items: 1 to 20 of 7587
1.
rs1491576275 has merged into rs201637583 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TG>-
[Show Flanks]
- Chromosome:
- X:103917446
(GRCh38)
X:103172041
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103917445:TG:
- Gene:
- TMSB15B (Varview), TMSB15B-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,non_coding_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.07902/1458
(
ALFA)
-=0.00001/1
(GnomAD)
-=0.00005/1
(TOMMO)
-=0.37591/1086
(ALSPAC)
-=0.3781/1402
(TWINSUK)
-=0.38199/1442
(1000Genomes)
-=0.425/17
(GENOME_DK)
- HGVS:
2.
rs1491362029 has merged into rs782307917 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTT>-,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTTTT
[Show Flanks]
- Chromosome:
- X:103922094
(GRCh38)
X:103176675
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103922085:TTTTTTTTTTTTTT:TTTTTTTT,NC_000023.11:103922085:TTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000023.11:103922085:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000023.11:103922085:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000023.11:103922085:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000023.11:103922085:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT
- Gene:
- TMSB15B (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTT=0./0
(
ALFA)
-=0.175/7
(GENOME_DK)
- HGVS:
NC_000023.11:g.103922094_103922099del, NC_000023.11:g.103922097_103922099del, NC_000023.11:g.103922098_103922099del, NC_000023.11:g.103922099del, NC_000023.11:g.103922099dup, NC_000023.11:g.103922096_103922099dup, NW_004070885.1:g.58510_58515del, NW_004070885.1:g.58513_58515del, NW_004070885.1:g.58514_58515del, NW_004070885.1:g.58515del, NW_004070885.1:g.58515dup, NW_004070885.1:g.58512_58515dup, NC_000023.10:g.103176675_103176680del, NC_000023.10:g.103176678_103176680del, NC_000023.10:g.103176679_103176680del, NC_000023.10:g.103176680del, NC_000023.10:g.103176680dup, NC_000023.10:g.103176677_103176680dup
3.
rs1491332778 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->C
[Show Flanks]
- Chromosome:
- X:103922086
(GRCh38)
X:103176668
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103922086::C
- Gene:
- TMSB15B (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.00005/1
(TOMMO)
C=0.0001/9
(GnomAD)
- HGVS:
4.
rs1491110361 has merged into rs551801081 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GGGGGGG>-,GGGGG,GGGGGG,GGGGGGGG,GGGGGGGGG
[Show Flanks]
- Chromosome:
- X:103917450
(GRCh38)
X:103172045
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103917446:GGGGGGGGGG:GGG,NC_000023.11:103917446:GGGGGGGGGG:GGGGGGGG,NC_000023.11:103917446:GGGGGGGGGG:GGGGGGGGG,NC_000023.11:103917446:GGGGGGGGGG:GGGGGGGGGGG,NC_000023.11:103917446:GGGGGGGGGG:GGGGGGGGGGGG
- Gene:
- TMSB15B (Varview), TMSB15B-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,non_coding_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGGG=0./0
(
ALFA)
-=0.00093/12
(TOMMO)
- HGVS:
NC_000023.11:g.103917450_103917456del, NC_000023.11:g.103917455_103917456del, NC_000023.11:g.103917456del, NC_000023.11:g.103917456dup, NC_000023.11:g.103917455_103917456dup, NW_004070885.1:g.53866_53872del, NW_004070885.1:g.53871_53872del, NW_004070885.1:g.53872del, NW_004070885.1:g.53872dup, NW_004070885.1:g.53871_53872dup, NC_000023.10:g.103172045_103172051del, NC_000023.10:g.103172050_103172051del, NC_000023.10:g.103172051del, NC_000023.10:g.103172051dup, NC_000023.10:g.103172050_103172051dup, NR_146556.1:n.1198_1204del, NR_146556.1:n.1203_1204del, NR_146556.1:n.1204del, NR_146556.1:n.1204dup, NR_146556.1:n.1203_1204dup
5.
rs1490989488 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- X:103893475
(GRCh38)
X:103148396
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103893474:T:C
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000011/3
(TOPMED)
C=0.000013/1
(GnomAD)
- HGVS:
6.
rs1490983248 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- X:103892637
(GRCh38)
X:103147558
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103892636:T:G
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
- HGVS:
7.
rs1490812812 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- X:103917382
(GRCh38)
X:103171976
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103917381:C:A,NC_000023.11:103917381:C:T
- Gene:
- TMSB15B (Varview), TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.00002/2
(GnomAD)
A=0.00171/5
(KOREAN)
- HGVS:
8.
rs1490789950 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- X:103899063
(GRCh38)
X:103153984
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103899062:A:T
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.00006/5
(GnomAD)
- HGVS:
9.
rs1490695350 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- X:103884032
(GRCh38)
X:103138953
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103884031:G:A
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.00001/1
(GnomAD)
- HGVS:
10.
rs1490649772 has merged into rs4006716 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TATATATATATATATATATATATATATA>-,TA,TATA,TATATA,TATATATA,TATATATATA,TATATATATATA,TATATATATATATA,TATATATATATATATA,TATATATATATATATATA,TATATATATATATATATATA,TATATATATATATATATATATA,TATATATATATATATATATATATA,TATATATATATATATATATATATATA,TATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATA
[Show Flanks]
- Chromosome:
- X:103917655
(GRCh38)
X:103172250
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000023.11:103917644:TATATATATATATATATATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
- Gene:
- TMSB15B (Varview), TMSB15B-AS1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000023.11:g.103917645TA[5], NC_000023.11:g.103917645TA[6], NC_000023.11:g.103917645TA[7], NC_000023.11:g.103917645TA[8], NC_000023.11:g.103917645TA[9], NC_000023.11:g.103917645TA[10], NC_000023.11:g.103917645TA[11], NC_000023.11:g.103917645TA[12], NC_000023.11:g.103917645TA[13], NC_000023.11:g.103917645TA[14], NC_000023.11:g.103917645TA[15], NC_000023.11:g.103917645TA[16], NC_000023.11:g.103917645TA[17], NC_000023.11:g.103917645TA[18], NC_000023.11:g.103917645TA[20], NC_000023.11:g.103917645TA[21], NC_000023.11:g.103917645TA[22], NC_000023.11:g.103917645TA[23], NC_000023.11:g.103917645TA[24], NC_000023.11:g.103917645TA[25], NC_000023.11:g.103917645TA[26], NC_000023.11:g.103917645TA[27], NC_000023.11:g.103917645TA[28], NC_000023.11:g.103917645TA[29], NC_000023.11:g.103917645TA[30], NC_000023.11:g.103917645TA[31], NC_000023.11:g.103917645TA[32], NW_004070885.1:g.54061TA[5], NW_004070885.1:g.54061TA[6], NW_004070885.1:g.54061TA[7], NW_004070885.1:g.54061TA[8], NW_004070885.1:g.54061TA[9], NW_004070885.1:g.54061TA[10], NW_004070885.1:g.54061TA[11], NW_004070885.1:g.54061TA[12], NW_004070885.1:g.54061TA[13], NW_004070885.1:g.54061TA[14], NW_004070885.1:g.54061TA[15], NW_004070885.1:g.54061TA[16], NW_004070885.1:g.54061TA[17], NW_004070885.1:g.54061TA[18], NW_004070885.1:g.54061TA[20], NW_004070885.1:g.54061TA[21], NW_004070885.1:g.54061TA[22], NW_004070885.1:g.54061TA[23], NW_004070885.1:g.54061TA[24], NW_004070885.1:g.54061TA[25], NW_004070885.1:g.54061TA[26], NW_004070885.1:g.54061TA[27], NW_004070885.1:g.54061TA[28], NW_004070885.1:g.54061TA[29], NW_004070885.1:g.54061TA[30], NW_004070885.1:g.54061TA[31], NW_004070885.1:g.54061TA[32], NC_000023.10:g.103172240TA[19], NC_000023.10:g.103172240TA[5], NC_000023.10:g.103172240TA[6], NC_000023.10:g.103172240TA[7], NC_000023.10:g.103172240TA[8], NC_000023.10:g.103172240TA[9], NC_000023.10:g.103172240TA[10], NC_000023.10:g.103172240TA[11], NC_000023.10:g.103172240TA[12], NC_000023.10:g.103172240TA[14], NC_000023.10:g.103172240TA[15], NC_000023.10:g.103172240TA[16], NC_000023.10:g.103172240TA[17], NC_000023.10:g.103172240TA[18], NC_000023.10:g.103172240TA[20], NC_000023.10:g.103172240TA[21], NC_000023.10:g.103172240TA[22], NC_000023.10:g.103172240TA[23], NC_000023.10:g.103172240TA[24], NC_000023.10:g.103172240TA[25], NC_000023.10:g.103172240TA[26], NC_000023.10:g.103172240TA[27], NC_000023.10:g.103172240TA[28], NC_000023.10:g.103172240TA[29], NC_000023.10:g.103172240TA[30], NC_000023.10:g.103172240TA[31], NC_000023.10:g.103172240TA[32], NR_146556.1:n.969TA[5], NR_146556.1:n.969TA[6], NR_146556.1:n.969TA[7], NR_146556.1:n.969TA[8], NR_146556.1:n.969TA[9], NR_146556.1:n.969TA[10], NR_146556.1:n.969TA[11], NR_146556.1:n.969TA[12], NR_146556.1:n.969TA[13], NR_146556.1:n.969TA[14], NR_146556.1:n.969TA[15], NR_146556.1:n.969TA[16], NR_146556.1:n.969TA[17], NR_146556.1:n.969TA[18], NR_146556.1:n.969TA[20], NR_146556.1:n.969TA[21], NR_146556.1:n.969TA[22], NR_146556.1:n.969TA[23], NR_146556.1:n.969TA[24], NR_146556.1:n.969TA[25], NR_146556.1:n.969TA[26], NR_146556.1:n.969TA[27], NR_146556.1:n.969TA[28], NR_146556.1:n.969TA[29], NR_146556.1:n.969TA[30], NR_146556.1:n.969TA[31], NR_146556.1:n.969TA[32]
11.
rs1490630023 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- X:103899360
(GRCh38)
X:103154281
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103899359:T:G
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000011/1
(GnomAD)
- HGVS:
12.
rs1490607193 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- X:103887062
(GRCh38)
X:103141983
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103887061:T:C
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000023/6
(TOPMED)
- HGVS:
13.
rs1490556060 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- X:103898575
(GRCh38)
X:103153496
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103898574:T:C
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000011/1
(GnomAD)
- HGVS:
14.
rs1490535105 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- X:103885877
(GRCh38)
X:103140798
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103885876:G:A,NC_000023.11:103885876:G:T
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
A=0.00001/1
(GnomAD)
- HGVS:
15.
rs1490372540 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- X:103905586
(GRCh38)
X:103160507
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103905585:G:A
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.00001/1
(GnomAD)
- HGVS:
16.
rs1490326194 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- X:103916572
(GRCh38)
X:103171166
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103916571:T:C
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0.000142/2
(
ALFA)
C=0.000008/2
(TOPMED)
- HGVS:
17.
rs1490303281 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- X:103898601
(GRCh38)
X:103153522
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103898600:G:C
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.00226/35
(
ALFA)
C=0.00005/1
(TOMMO)
- HGVS:
18.
rs1490232260 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- X:103897848
(GRCh38)
X:103152769
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103897847:A:G,NC_000023.11:103897847:A:T
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.00028/25
(GnomAD)
- HGVS:
19.
rs1490188579 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- X:103883252
(GRCh38)
X:103138173
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103883251:A:G
- Gene:
- TMSB15B-AS1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.00001/1
(GnomAD)
- HGVS:
20.
rs1490067351 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- X:103923729
(GRCh38)
X:103178310
(GRCh37)
- Canonical SPDI:
- NC_000023.11:103923728:A:G
- Gene:
- TMSB15B (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.00001/1
(GnomAD)
G=0.000015/4
(TOPMED)
- HGVS: