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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs72080135

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr19:18843718-18843752 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(GT)10 / del(GT)9 / del(GT)8 / …

del(GT)10 / del(GT)9 / del(GT)8 / del(GT)7 / del(GT)6 / del(GT)5 / del(GT)4 / del(GT)3 / delGTGT / delGT / dupGT / dupGTGT / dup(GT)3 / dup(GT)4 / dup(GT)5 / dup(GT)6 / dup(GT)7

Variation Type
Indel Insertion and Deletion
Frequency
dupGT=0.07922 (825/10414, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
UPF1 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 10414 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.81650 TGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.02593, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.07413, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.07922, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00250, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00163, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00010, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000 0.855675 0.012144 0.132181 16
European Sub 9264 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.7951 TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0291, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0832, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0878, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0028, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0018, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0001, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 0.8363 0.013754 0.149946 11
African Sub 428 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.979 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.021, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 0.957944 0.0 0.042056 0
African Others Sub 14 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
African American Sub 414 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.978 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.022, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 0.956522 0.0 0.043478 0
Asian Sub 96 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
East Asian Sub 76 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 20 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 54 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Latin American 2 Sub 346 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.000 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A
South Asian Sub 48 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Other Sub 178 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.978 TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.006, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.017, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 0.977273 0.011364 0.011364 21


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 10414 (TG)17T=0.81650 del(GT)10=0.00000, del(GT)9=0.00000, del(GT)8=0.00000, del(GT)7=0.00000, del(GT)6=0.00000, del(GT)5=0.00000, del(GT)4=0.00000, del(GT)3=0.00000, delGTGT=0.02593, delGT=0.07413, dupGT=0.07922, dupGTGT=0.00163, dup(GT)3=0.00250, dup(GT)4=0.00010, dup(GT)5=0.00000, dup(GT)6=0.00000, dup(GT)7=0.00000
Allele Frequency Aggregator European Sub 9264 (TG)17T=0.7951 del(GT)10=0.0000, del(GT)9=0.0000, del(GT)8=0.0000, del(GT)7=0.0000, del(GT)6=0.0000, del(GT)5=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0291, delGT=0.0832, dupGT=0.0878, dupGTGT=0.0018, dup(GT)3=0.0028, dup(GT)4=0.0001, dup(GT)5=0.0000, dup(GT)6=0.0000, dup(GT)7=0.0000
Allele Frequency Aggregator African Sub 428 (TG)17T=0.979 del(GT)10=0.000, del(GT)9=0.000, del(GT)8=0.000, del(GT)7=0.000, del(GT)6=0.000, del(GT)5=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.021, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000, dup(GT)6=0.000, dup(GT)7=0.000
Allele Frequency Aggregator Latin American 2 Sub 346 (TG)17T=1.000 del(GT)10=0.000, del(GT)9=0.000, del(GT)8=0.000, del(GT)7=0.000, del(GT)6=0.000, del(GT)5=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000, dup(GT)6=0.000, dup(GT)7=0.000
Allele Frequency Aggregator Other Sub 178 (TG)17T=0.978 del(GT)10=0.000, del(GT)9=0.000, del(GT)8=0.000, del(GT)7=0.000, del(GT)6=0.000, del(GT)5=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.006, dupGT=0.017, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000, dup(GT)5=0.000, dup(GT)6=0.000, dup(GT)7=0.000
Allele Frequency Aggregator Asian Sub 96 (TG)17T=1.00 del(GT)10=0.00, del(GT)9=0.00, del(GT)8=0.00, del(GT)7=0.00, del(GT)6=0.00, del(GT)5=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00, dup(GT)6=0.00, dup(GT)7=0.00
Allele Frequency Aggregator Latin American 1 Sub 54 (TG)17T=1.00 del(GT)10=0.00, del(GT)9=0.00, del(GT)8=0.00, del(GT)7=0.00, del(GT)6=0.00, del(GT)5=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00, dup(GT)6=0.00, dup(GT)7=0.00
Allele Frequency Aggregator South Asian Sub 48 (TG)17T=1.00 del(GT)10=0.00, del(GT)9=0.00, del(GT)8=0.00, del(GT)7=0.00, del(GT)6=0.00, del(GT)5=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00, dup(GT)5=0.00, dup(GT)6=0.00, dup(GT)7=0.00
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[7]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[8]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[9]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[10]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[11]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[12]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[13]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[14]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[15]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[16]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[18]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[19]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[20]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[21]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[22]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[23]
GRCh38.p14 chr 19 NC_000019.10:g.18843719GT[24]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[7]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[8]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[9]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[10]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[11]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[12]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[13]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[14]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[15]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[16]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[18]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[19]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[20]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[21]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[22]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[23]
GRCh37.p13 chr 19 NC_000019.9:g.18954528GT[24]
Gene: UPF1, UPF1 RNA helicase and ATPase (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UPF1 transcript variant 1 NM_001297549.2:c.232-2262…

NM_001297549.2:c.232-2262TG[7]

N/A Intron Variant
UPF1 transcript variant 2 NM_002911.4:c.232-2262TG[…

NM_002911.4:c.232-2262TG[7]

N/A Intron Variant
UPF1 transcript variant X1 XM_017027105.3:c.232-2262…

XM_017027105.3:c.232-2262TG[7]

N/A Intron Variant
UPF1 transcript variant X2 XM_017027106.3:c.232-2262…

XM_017027106.3:c.232-2262TG[7]

N/A Intron Variant
UPF1 transcript variant X3 XM_047439191.1:c.103-2262…

XM_047439191.1:c.103-2262TG[7]

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (TG)17T= del(GT)10 del(GT)9 del(GT)8 del(GT)7 del(GT)6 del(GT)5 del(GT)4 del(GT)3 delGTGT delGT dupGT dupGTGT dup(GT)3 dup(GT)4 dup(GT)5 dup(GT)6 dup(GT)7
GRCh38.p14 chr 19 NC_000019.10:g.18843718_18843752= NC_000019.10:g.18843719GT[7] NC_000019.10:g.18843719GT[8] NC_000019.10:g.18843719GT[9] NC_000019.10:g.18843719GT[10] NC_000019.10:g.18843719GT[11] NC_000019.10:g.18843719GT[12] NC_000019.10:g.18843719GT[13] NC_000019.10:g.18843719GT[14] NC_000019.10:g.18843719GT[15] NC_000019.10:g.18843719GT[16] NC_000019.10:g.18843719GT[18] NC_000019.10:g.18843719GT[19] NC_000019.10:g.18843719GT[20] NC_000019.10:g.18843719GT[21] NC_000019.10:g.18843719GT[22] NC_000019.10:g.18843719GT[23] NC_000019.10:g.18843719GT[24]
GRCh37.p13 chr 19 NC_000019.9:g.18954527_18954561= NC_000019.9:g.18954528GT[7] NC_000019.9:g.18954528GT[8] NC_000019.9:g.18954528GT[9] NC_000019.9:g.18954528GT[10] NC_000019.9:g.18954528GT[11] NC_000019.9:g.18954528GT[12] NC_000019.9:g.18954528GT[13] NC_000019.9:g.18954528GT[14] NC_000019.9:g.18954528GT[15] NC_000019.9:g.18954528GT[16] NC_000019.9:g.18954528GT[18] NC_000019.9:g.18954528GT[19] NC_000019.9:g.18954528GT[20] NC_000019.9:g.18954528GT[21] NC_000019.9:g.18954528GT[22] NC_000019.9:g.18954528GT[23] NC_000019.9:g.18954528GT[24]
UPF1 transcript variant 1 NM_001297549.2:c.232-2262= NM_001297549.2:c.232-2262TG[7] NM_001297549.2:c.232-2262TG[8] NM_001297549.2:c.232-2262TG[9] NM_001297549.2:c.232-2262TG[10] NM_001297549.2:c.232-2262TG[11] NM_001297549.2:c.232-2262TG[12] NM_001297549.2:c.232-2262TG[13] NM_001297549.2:c.232-2262TG[14] NM_001297549.2:c.232-2262TG[15] NM_001297549.2:c.232-2262TG[16] NM_001297549.2:c.232-2262TG[18] NM_001297549.2:c.232-2262TG[19] NM_001297549.2:c.232-2262TG[20] NM_001297549.2:c.232-2262TG[21] NM_001297549.2:c.232-2262TG[22] NM_001297549.2:c.232-2262TG[23] NM_001297549.2:c.232-2262TG[24]
UPF1 transcript variant 2 NM_002911.3:c.232-2262= NM_002911.3:c.232-2262TG[7] NM_002911.3:c.232-2262TG[8] NM_002911.3:c.232-2262TG[9] NM_002911.3:c.232-2262TG[10] NM_002911.3:c.232-2262TG[11] NM_002911.3:c.232-2262TG[12] NM_002911.3:c.232-2262TG[13] NM_002911.3:c.232-2262TG[14] NM_002911.3:c.232-2262TG[15] NM_002911.3:c.232-2262TG[16] NM_002911.3:c.232-2262TG[18] NM_002911.3:c.232-2262TG[19] NM_002911.3:c.232-2262TG[20] NM_002911.3:c.232-2262TG[21] NM_002911.3:c.232-2262TG[22] NM_002911.3:c.232-2262TG[23] NM_002911.3:c.232-2262TG[24]
UPF1 transcript variant 2 NM_002911.4:c.232-2262= NM_002911.4:c.232-2262TG[7] NM_002911.4:c.232-2262TG[8] NM_002911.4:c.232-2262TG[9] NM_002911.4:c.232-2262TG[10] NM_002911.4:c.232-2262TG[11] NM_002911.4:c.232-2262TG[12] NM_002911.4:c.232-2262TG[13] NM_002911.4:c.232-2262TG[14] NM_002911.4:c.232-2262TG[15] NM_002911.4:c.232-2262TG[16] NM_002911.4:c.232-2262TG[18] NM_002911.4:c.232-2262TG[19] NM_002911.4:c.232-2262TG[20] NM_002911.4:c.232-2262TG[21] NM_002911.4:c.232-2262TG[22] NM_002911.4:c.232-2262TG[23] NM_002911.4:c.232-2262TG[24]
UPF1 transcript variant X1 XM_005260015.1:c.232-2262= XM_005260015.1:c.232-2262TG[7] XM_005260015.1:c.232-2262TG[8] XM_005260015.1:c.232-2262TG[9] XM_005260015.1:c.232-2262TG[10] XM_005260015.1:c.232-2262TG[11] XM_005260015.1:c.232-2262TG[12] XM_005260015.1:c.232-2262TG[13] XM_005260015.1:c.232-2262TG[14] XM_005260015.1:c.232-2262TG[15] XM_005260015.1:c.232-2262TG[16] XM_005260015.1:c.232-2262TG[18] XM_005260015.1:c.232-2262TG[19] XM_005260015.1:c.232-2262TG[20] XM_005260015.1:c.232-2262TG[21] XM_005260015.1:c.232-2262TG[22] XM_005260015.1:c.232-2262TG[23] XM_005260015.1:c.232-2262TG[24]
UPF1 transcript variant X1 XM_017027105.3:c.232-2262= XM_017027105.3:c.232-2262TG[7] XM_017027105.3:c.232-2262TG[8] XM_017027105.3:c.232-2262TG[9] XM_017027105.3:c.232-2262TG[10] XM_017027105.3:c.232-2262TG[11] XM_017027105.3:c.232-2262TG[12] XM_017027105.3:c.232-2262TG[13] XM_017027105.3:c.232-2262TG[14] XM_017027105.3:c.232-2262TG[15] XM_017027105.3:c.232-2262TG[16] XM_017027105.3:c.232-2262TG[18] XM_017027105.3:c.232-2262TG[19] XM_017027105.3:c.232-2262TG[20] XM_017027105.3:c.232-2262TG[21] XM_017027105.3:c.232-2262TG[22] XM_017027105.3:c.232-2262TG[23] XM_017027105.3:c.232-2262TG[24]
UPF1 transcript variant X2 XM_017027106.3:c.232-2262= XM_017027106.3:c.232-2262TG[7] XM_017027106.3:c.232-2262TG[8] XM_017027106.3:c.232-2262TG[9] XM_017027106.3:c.232-2262TG[10] XM_017027106.3:c.232-2262TG[11] XM_017027106.3:c.232-2262TG[12] XM_017027106.3:c.232-2262TG[13] XM_017027106.3:c.232-2262TG[14] XM_017027106.3:c.232-2262TG[15] XM_017027106.3:c.232-2262TG[16] XM_017027106.3:c.232-2262TG[18] XM_017027106.3:c.232-2262TG[19] XM_017027106.3:c.232-2262TG[20] XM_017027106.3:c.232-2262TG[21] XM_017027106.3:c.232-2262TG[22] XM_017027106.3:c.232-2262TG[23] XM_017027106.3:c.232-2262TG[24]
UPF1 transcript variant X3 XM_047439191.1:c.103-2262= XM_047439191.1:c.103-2262TG[7] XM_047439191.1:c.103-2262TG[8] XM_047439191.1:c.103-2262TG[9] XM_047439191.1:c.103-2262TG[10] XM_047439191.1:c.103-2262TG[11] XM_047439191.1:c.103-2262TG[12] XM_047439191.1:c.103-2262TG[13] XM_047439191.1:c.103-2262TG[14] XM_047439191.1:c.103-2262TG[15] XM_047439191.1:c.103-2262TG[16] XM_047439191.1:c.103-2262TG[18] XM_047439191.1:c.103-2262TG[19] XM_047439191.1:c.103-2262TG[20] XM_047439191.1:c.103-2262TG[21] XM_047439191.1:c.103-2262TG[22] XM_047439191.1:c.103-2262TG[23] XM_047439191.1:c.103-2262TG[24]
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

77 SubSNP, 39 Frequency submissions
No Submitter Submission ID Date (Build)
1 HGSV ss77864990 Aug 21, 2014 (142)
2 HGSV ss80209052 Aug 21, 2014 (142)
3 HGSV ss82442736 Oct 12, 2018 (152)
4 HUMANGENOME_JCVI ss95724006 Oct 12, 2018 (152)
5 1000GENOMES ss328022380 May 09, 2011 (137)
6 1000GENOMES ss328269687 May 09, 2011 (137)
7 LUNTER ss552611522 Apr 25, 2013 (138)
8 LUNTER ss552994967 Apr 25, 2013 (138)
9 LUNTER ss553657902 Apr 25, 2013 (138)
10 SSMP ss664430084 Apr 01, 2015 (144)
11 EVA_UK10K_ALSPAC ss1709148073 Apr 01, 2015 (144)
12 EVA_UK10K_TWINSUK ss1709148111 Apr 01, 2015 (144)
13 EVA_UK10K_TWINSUK ss1710784617 Apr 01, 2015 (144)
14 EVA_UK10K_ALSPAC ss1710784618 Apr 01, 2015 (144)
15 SWEGEN ss3017213058 Nov 08, 2017 (151)
16 MCHAISSO ss3065705056 Nov 08, 2017 (151)
17 URBANLAB ss3650881738 Oct 12, 2018 (152)
18 EVA_DECODE ss3702481815 Jul 13, 2019 (153)
19 EVA_DECODE ss3702481816 Jul 13, 2019 (153)
20 EVA_DECODE ss3702481817 Jul 13, 2019 (153)
21 EVA_DECODE ss3702481818 Jul 13, 2019 (153)
22 EVA_DECODE ss3702481819 Jul 13, 2019 (153)
23 EVA_DECODE ss3702481820 Jul 13, 2019 (153)
24 ACPOP ss3742913012 Jul 13, 2019 (153)
25 ACPOP ss3742913013 Jul 13, 2019 (153)
26 ACPOP ss3742913014 Jul 13, 2019 (153)
27 ACPOP ss3742913015 Jul 13, 2019 (153)
28 ACPOP ss3742913016 Jul 13, 2019 (153)
29 PACBIO ss3788488136 Jul 13, 2019 (153)
30 PACBIO ss3793404776 Jul 13, 2019 (153)
31 PACBIO ss3798291546 Jul 13, 2019 (153)
32 EVA ss3835387393 Apr 27, 2020 (154)
33 EVA ss3841313486 Apr 27, 2020 (154)
34 EVA ss3846818353 Apr 27, 2020 (154)
35 GNOMAD ss4328783714 Apr 27, 2021 (155)
36 GNOMAD ss4328783715 Apr 27, 2021 (155)
37 GNOMAD ss4328783716 Apr 27, 2021 (155)
38 GNOMAD ss4328783717 Apr 27, 2021 (155)
39 GNOMAD ss4328783718 Apr 27, 2021 (155)
40 GNOMAD ss4328783719 Apr 27, 2021 (155)
41 GNOMAD ss4328783720 Apr 27, 2021 (155)
42 GNOMAD ss4328783721 Apr 27, 2021 (155)
43 GNOMAD ss4328783722 Apr 27, 2021 (155)
44 GNOMAD ss4328783723 Apr 27, 2021 (155)
45 GNOMAD ss4328783724 Apr 27, 2021 (155)
46 GNOMAD ss4328783725 Apr 27, 2021 (155)
47 GNOMAD ss4328783726 Apr 27, 2021 (155)
48 GNOMAD ss4328783727 Apr 27, 2021 (155)
49 GNOMAD ss4328783728 Apr 27, 2021 (155)
50 GNOMAD ss4328783729 Apr 27, 2021 (155)
51 GNOMAD ss4328783730 Apr 27, 2021 (155)
52 TOMMO_GENOMICS ss5227071707 Apr 27, 2021 (155)
53 TOMMO_GENOMICS ss5227071708 Apr 27, 2021 (155)
54 TOMMO_GENOMICS ss5227071709 Apr 27, 2021 (155)
55 TOMMO_GENOMICS ss5227071710 Apr 27, 2021 (155)
56 TOMMO_GENOMICS ss5227071711 Apr 27, 2021 (155)
57 TOMMO_GENOMICS ss5227071712 Apr 27, 2021 (155)
58 1000G_HIGH_COVERAGE ss5306737453 Oct 16, 2022 (156)
59 1000G_HIGH_COVERAGE ss5306737454 Oct 16, 2022 (156)
60 1000G_HIGH_COVERAGE ss5306737455 Oct 16, 2022 (156)
61 1000G_HIGH_COVERAGE ss5306737456 Oct 16, 2022 (156)
62 HUGCELL_USP ss5499332818 Oct 16, 2022 (156)
63 HUGCELL_USP ss5499332819 Oct 16, 2022 (156)
64 HUGCELL_USP ss5499332820 Oct 16, 2022 (156)
65 HUGCELL_USP ss5499332821 Oct 16, 2022 (156)
66 HUGCELL_USP ss5499332822 Oct 16, 2022 (156)
67 HUGCELL_USP ss5499332823 Oct 16, 2022 (156)
68 TOMMO_GENOMICS ss5785468214 Oct 16, 2022 (156)
69 TOMMO_GENOMICS ss5785468215 Oct 16, 2022 (156)
70 TOMMO_GENOMICS ss5785468216 Oct 16, 2022 (156)
71 TOMMO_GENOMICS ss5785468217 Oct 16, 2022 (156)
72 TOMMO_GENOMICS ss5785468218 Oct 16, 2022 (156)
73 TOMMO_GENOMICS ss5785468219 Oct 16, 2022 (156)
74 EVA ss5840348884 Oct 16, 2022 (156)
75 EVA ss5840348885 Oct 16, 2022 (156)
76 EVA ss5840348886 Oct 16, 2022 (156)
77 EVA ss5852230753 Oct 16, 2022 (156)
78 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 42096028 (NC_000019.9:18954526::TG 406/3854)
Row 42096029 (NC_000019.9:18954526:TG: 1349/3854)

- Oct 12, 2018 (152)
79 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 42096028 (NC_000019.9:18954526::TG 406/3854)
Row 42096029 (NC_000019.9:18954526:TG: 1349/3854)

- Oct 12, 2018 (152)
80 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
81 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
82 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
83 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
84 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
85 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
86 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
87 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
88 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
89 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
90 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
91 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
92 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
93 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
94 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
95 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
96 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 535968799 (NC_000019.10:18843717::TG 13051/132458)
Row 535968800 (NC_000019.10:18843717::TGTG 2247/132562)
Row 535968801 (NC_000019.10:18843717::TGTGTG 964/132586)...

- Apr 27, 2021 (155)
97 Northern Sweden

Submission ignored due to conflicting rows:
Row 16197877 (NC_000019.9:18954526:TGTG: 20/600)
Row 16197878 (NC_000019.9:18954526:TG: 124/600)
Row 16197879 (NC_000019.9:18954526::TG 102/600)...

- Jul 13, 2019 (153)
98 Northern Sweden

Submission ignored due to conflicting rows:
Row 16197877 (NC_000019.9:18954526:TGTG: 20/600)
Row 16197878 (NC_000019.9:18954526:TG: 124/600)
Row 16197879 (NC_000019.9:18954526::TG 102/600)...

- Jul 13, 2019 (153)
99 Northern Sweden

Submission ignored due to conflicting rows:
Row 16197877 (NC_000019.9:18954526:TGTG: 20/600)
Row 16197878 (NC_000019.9:18954526:TG: 124/600)
Row 16197879 (NC_000019.9:18954526::TG 102/600)...

- Jul 13, 2019 (153)
100 Northern Sweden

Submission ignored due to conflicting rows:
Row 16197877 (NC_000019.9:18954526:TGTG: 20/600)
Row 16197878 (NC_000019.9:18954526:TG: 124/600)
Row 16197879 (NC_000019.9:18954526::TG 102/600)...

- Jul 13, 2019 (153)
101 Northern Sweden

Submission ignored due to conflicting rows:
Row 16197877 (NC_000019.9:18954526:TGTG: 20/600)
Row 16197878 (NC_000019.9:18954526:TG: 124/600)
Row 16197879 (NC_000019.9:18954526::TG 102/600)...

- Jul 13, 2019 (153)
102 8.3KJPN

Submission ignored due to conflicting rows:
Row 85041014 (NC_000019.9:18954526:TGTGTGTGTGTGTG: 415/16730)
Row 85041015 (NC_000019.9:18954526:TG: 1685/16730)
Row 85041016 (NC_000019.9:18954526::TG 672/16730)...

- Apr 27, 2021 (155)
103 8.3KJPN

Submission ignored due to conflicting rows:
Row 85041014 (NC_000019.9:18954526:TGTGTGTGTGTGTG: 415/16730)
Row 85041015 (NC_000019.9:18954526:TG: 1685/16730)
Row 85041016 (NC_000019.9:18954526::TG 672/16730)...

- Apr 27, 2021 (155)
104 8.3KJPN

Submission ignored due to conflicting rows:
Row 85041014 (NC_000019.9:18954526:TGTGTGTGTGTGTG: 415/16730)
Row 85041015 (NC_000019.9:18954526:TG: 1685/16730)
Row 85041016 (NC_000019.9:18954526::TG 672/16730)...

- Apr 27, 2021 (155)
105 8.3KJPN

Submission ignored due to conflicting rows:
Row 85041014 (NC_000019.9:18954526:TGTGTGTGTGTGTG: 415/16730)
Row 85041015 (NC_000019.9:18954526:TG: 1685/16730)
Row 85041016 (NC_000019.9:18954526::TG 672/16730)...

- Apr 27, 2021 (155)
106 8.3KJPN

Submission ignored due to conflicting rows:
Row 85041014 (NC_000019.9:18954526:TGTGTGTGTGTGTG: 415/16730)
Row 85041015 (NC_000019.9:18954526:TG: 1685/16730)
Row 85041016 (NC_000019.9:18954526::TG 672/16730)...

- Apr 27, 2021 (155)
107 8.3KJPN

Submission ignored due to conflicting rows:
Row 85041014 (NC_000019.9:18954526:TGTGTGTGTGTGTG: 415/16730)
Row 85041015 (NC_000019.9:18954526:TG: 1685/16730)
Row 85041016 (NC_000019.9:18954526::TG 672/16730)...

- Apr 27, 2021 (155)
108 14KJPN

Submission ignored due to conflicting rows:
Row 119305318 (NC_000019.10:18843717:TGTGTGTGTGTGTG: 700/28244)
Row 119305319 (NC_000019.10:18843717:TG: 2869/28244)
Row 119305320 (NC_000019.10:18843717::TG 1085/28244)...

- Oct 16, 2022 (156)
109 14KJPN

Submission ignored due to conflicting rows:
Row 119305318 (NC_000019.10:18843717:TGTGTGTGTGTGTG: 700/28244)
Row 119305319 (NC_000019.10:18843717:TG: 2869/28244)
Row 119305320 (NC_000019.10:18843717::TG 1085/28244)...

- Oct 16, 2022 (156)
110 14KJPN

Submission ignored due to conflicting rows:
Row 119305318 (NC_000019.10:18843717:TGTGTGTGTGTGTG: 700/28244)
Row 119305319 (NC_000019.10:18843717:TG: 2869/28244)
Row 119305320 (NC_000019.10:18843717::TG 1085/28244)...

- Oct 16, 2022 (156)
111 14KJPN

Submission ignored due to conflicting rows:
Row 119305318 (NC_000019.10:18843717:TGTGTGTGTGTGTG: 700/28244)
Row 119305319 (NC_000019.10:18843717:TG: 2869/28244)
Row 119305320 (NC_000019.10:18843717::TG 1085/28244)...

- Oct 16, 2022 (156)
112 14KJPN

Submission ignored due to conflicting rows:
Row 119305318 (NC_000019.10:18843717:TGTGTGTGTGTGTG: 700/28244)
Row 119305319 (NC_000019.10:18843717:TG: 2869/28244)
Row 119305320 (NC_000019.10:18843717::TG 1085/28244)...

- Oct 16, 2022 (156)
113 14KJPN

Submission ignored due to conflicting rows:
Row 119305318 (NC_000019.10:18843717:TGTGTGTGTGTGTG: 700/28244)
Row 119305319 (NC_000019.10:18843717:TG: 2869/28244)
Row 119305320 (NC_000019.10:18843717::TG 1085/28244)...

- Oct 16, 2022 (156)
114 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 42096028 (NC_000019.9:18954526::TG 381/3708)
Row 42096029 (NC_000019.9:18954526:TG: 1259/3708)

- Oct 12, 2018 (152)
115 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 42096028 (NC_000019.9:18954526::TG 381/3708)
Row 42096029 (NC_000019.9:18954526:TG: 1259/3708)

- Oct 12, 2018 (152)
116 ALFA NC_000019.10 - 18843718 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs145260743 May 04, 2012 (137)
rs373267279 May 13, 2013 (138)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4328783730 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTG:

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

(self)
ss4328783729 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTG:

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT

(self)
ss4328783728 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTG:

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss5227071707 NC_000019.9:18954526:TGTGTGTGTGTGT…

NC_000019.9:18954526:TGTGTGTGTGTGTG:

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783727, ss5785468214 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTG:

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss5227071712 NC_000019.9:18954526:TGTGTGTGTGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783726, ss5785468219 NC_000019.10:18843717:TGTGTGTGTGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783725 NC_000019.10:18843717:TGTGTGTGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783724 NC_000019.10:18843717:TGTGTGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3702481815, ss4328783723 NC_000019.10:18843717:TGTGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss77864990 NC_000019.8:18815557:GTGT: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3017213058, ss3742913012, ss5227071710, ss5840348886 NC_000019.9:18954526:TGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3065705056, ss4328783722, ss5306737456, ss5499332819, ss5785468217 NC_000019.10:18843717:TGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3702481816 NC_000019.10:18843719:TGTG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss328022380, ss328269687, ss552611522, ss552994967, ss553657902 NC_000019.8:18815526:TG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss80209052 NC_000019.8:18815559:GT: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss664430084, ss1709148073, ss1709148111, ss3742913013, ss3788488136, ss3793404776, ss3798291546, ss3835387393, ss3841313486, ss5227071708, ss5840348884 NC_000019.9:18954526:TG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3846818353, ss4328783721, ss5306737453, ss5499332818, ss5785468215 NC_000019.10:18843717:TG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3702481817 NC_000019.10:18843721:TG: NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3742913014, ss5227071709, ss5840348885 NC_000019.9:18954526::TG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss1710784617, ss1710784618 NC_000019.9:18954528::TG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783714, ss5306737455, ss5499332820, ss5785468216, ss5852230753 NC_000019.10:18843717::TG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3702481818 NC_000019.10:18843723::TG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3650881738 NC_000019.10:18843732::GT NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss82442736, ss95724006 NT_011295.11:10217363::GT NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3742913015, ss5227071711 NC_000019.9:18954526::TGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783715, ss5499332821, ss5785468218 NC_000019.10:18843717::TGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3702481819 NC_000019.10:18843723::TGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3742913016 NC_000019.9:18954526::TGTGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783716, ss5499332822 NC_000019.10:18843717::TGTGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3702481820 NC_000019.10:18843723::TGTGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783717, ss5306737454, ss5499332823 NC_000019.10:18843717::TGTGTGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783718 NC_000019.10:18843717::TGTGTGTGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783719 NC_000019.10:18843717::TGTGTGTGTGTG NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4328783720 NC_000019.10:18843717::TGTGTGTGTGT…

NC_000019.10:18843717::TGTGTGTGTGTGTG

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
5501296476 NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000019.10:18843717:TGTGTGTGTGTG…

NC_000019.10:18843717:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs72080135

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d