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Submitted SNP(ss) Details: ss77864990           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr19_18815557-18815562_1
RefSNP(rs#)rs562747859
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/GTGT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize103990250 489-490 47 reverse -4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77864990|allelePos=439|len=912|taxid=9606|alleles='-/GTGT'|mol=Genomic
 ATGCCTGCCT GAGAGGCACC CTGTGGACCT CACCCTGAGG CTGAGGGAAC AGCAGGTGCA
 AGGCCTGGGT GCTGGCAAAT GCAGACAGTG GTGCAAATGT TGGAGTAGAT GTCTGCGGCC
 TGAGAGTTTA TGATGGCACA TTTGGGGGGA TTTTTGAGTT TTTGAATTTC TGTGGTTTTC
 GTCTGTGGGA ATGAAGTGAC TTTCTTTGTT TTTTTTTTTT TTTTTTGAGA CAGAGTCTTG
 CTCTGTGACT CAGGCTGGAG TGCAGTGGTG TGATCTCGGC TCACTGCAAC CTCCGCCTCC
 TGGGTTCAAG CGATTCTCCT GCACGGGGAT TACAGGTGCG CATCACCATG CCCAGCTAAT
 CTTTTGTATT TTTAGTAGAG ATGGGGTTTT GCCATGTTGG CCAGGCTTGT GTGTGTGTGT
 GTGTGTGTGT GTGTGTGT
 N
 TGTTGTTAAG AGAGACAGGG TCTTGGTCTG TTGCTCAGGC TAAAGTTCAG TGGTACCATC
 ATAGCTCACA GCGGCCTTGA CCTGCTGGGG TCAAGCAATC CTCCGGCCTC AACCTCCTGA
 TTAGCTGGGA CTACAAGTGT GCGCCACCAC ACCTGGCTCG TTTGTGTATT TTTTTGTGGA
 GACAGGATCT TGGCTGTGTT GCCCAGGCTG GTCTTGAGAA CTCCCGGGCT CAAGCGATCC
 TCCCAAAGTG TTGGGATGAC AGGTGTGAGC CACCATTCCT AGCCTTGAAG TGACCTACTG
 TTGTGCTGCC CTGATGCACG GTCTGAGTTC TGGAGCATGT CTCTGGGCAG AAAGCCCCTG
 TACAGCTCTT AGATGGACTT CCAGGATGTG GTTTTAGTCG TAGCTAGGTT CACATCCAGA
 ACTAAAGGAG TTAGAGACTC CAGCTCTGGG GCCTCGTGTA TGACTAGGAA GTG

  Submitted Frequency for ss77864990 back to top
There is no frequency submission for ss77864990.


  dbSNP summary of Genotypes for ss77864990 back to top
No sufficient data to compute Hardy-weinberg probability for ss77864990.


  Submitted individual genotype for ss77864990 back to top
There is no individual genotype data for ss77864990.

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