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    LOC9310130 dynein assembly factor 1, axonemal [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9310130, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9310130
    Gene description
    dynein assembly factor 1, axonemal
    Locus tag
    ARALYDRAFT_489085
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9310130 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (9308377..9310949, complement)

    NW_003302550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At5g41620 Neighboring gene uncharacterized protein At1g43920, Chloroplastic Neighboring gene ruvB-like protein 1 Neighboring gene uncharacterized LOC9310132

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynein assembly factor 1, axonemal

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302550.1 Reference v.1.0 Primary Assembly

      Range
      9308377..9310949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002874017.2 → XP_002874063.1  dynein assembly factor 1, axonemal

      See identical proteins and their annotated locations for XP_002874063.1

      UniProtKB/TrEMBL
      D7M0W4
      Conserved Domains (3) summary
      cd00116
      Location:21 → 237
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:21 → 42
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:108 → 164
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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