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    Fibrillarin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835325, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Fibrillarin family protein
    Primary source
    TAIR:AT5G52490
    Locus tag
    AT5G52490
    See related
    Araport:AT5G52490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K24M7.24; K24M7_24
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (21298857..21300239)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene fibrillarin 1 Neighboring gene ncRNA Neighboring gene RNI-like superfamily protein Neighboring gene tRNA-Leu Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fibrillarin family protein
    NP_568773.1
    • Fibrillarin family protein; FUNCTIONS IN: methyltransferase activity, RNA binding; INVOLVED IN: tRNA processing, rRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 1 (TAIR:AT5G52470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21298857..21300239
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124628.1 → NP_568773.1  Fibrillarin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568773.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FHB3
      UniProtKB/TrEMBL
      A0A654GAK4
      Conserved Domains (1) summary
      pfam01269
      Location:61 → 289
      Fibrillarin; Fibrillarin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FHB3.1

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