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    MYB45 myb domain protein 45 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824053, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB45
    Official Full Name
    myb domain protein 45
    Primary source
    TAIR:AT3G48920
    Locus tag
    AT3G48920
    See related
    Araport:AT3G48920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMYB45; myb domain protein 45
    Summary
    Member of the R2R3 factor gene family.
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    Genomic context

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    See MYB45 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (18139172..18140772)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene membrane-associated progesterone binding protein 3 Neighboring gene single-stranded DNA endonuclease family protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene Remorin family protein Neighboring gene Pectin lyase-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_114751.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 45
    NP_190461.1
    • myb domain protein 45 (MYB45); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8926 Blast hits to 8195 proteins in 505 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 469; Plants - 5801; Viruses - 3; Other Eukaryotes - 1844 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18139172..18140772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114751.2 → NP_190461.1  myb domain protein 45 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XJ31, A0A654FE50, Q9SMT1
      Conserved Domains (1) summary
      PLN03091
      Location:15 → 126
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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