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    CHADL chondroadherin like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721158, updated on 5-Mar-2024

    Summary

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    Gene symbol
    CHADL
    Gene description
    chondroadherin like
    See related
    Ensembl:ENSMMUG00000014165
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CHADL in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (10269899..10288859)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) Unplaced Scaffold NW_014877706.1 (6..2875)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670351 Neighboring gene zinc finger CCCH-type containing 7B Neighboring gene Ran GTPase activating protein 1 Neighboring gene L3MBTL histone methyl-lysine binding protein 2 Neighboring gene uncharacterized LOC114670352 Neighboring gene uncharacterized LOC107000674

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chondroadherin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      10269899..10288859
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827666.1 → XP_028683499.1  chondroadherin-like protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZR43
      Conserved Domains (5) summary
      smart00013
      Location:74 → 106
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:712 → 760
      LRRCT; Leucine rich repeat C-terminal domain
      COG4886
      Location:505 → 714
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:467 → 487
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:201 → 259
      LRR_8; Leucine rich repeat

    2. XM_028827667.1 → XP_028683500.1  chondroadherin-like protein isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR43, A0A5F8AQW3
      Related
      ENSMMUP00000079304.1, ENSMMUT00000098589.1
      Conserved Domains (5) summary
      smart00013
      Location:74 → 106
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:712 → 760
      LRRCT; Leucine rich repeat C-terminal domain
      COG4886
      Location:505 → 714
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:467 → 487
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:201 → 259
      LRR_8; Leucine rich repeat

    RNA

    1. XR_003719855.1 RNA Sequence

    2. XR_003719854.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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