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    bath-5 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 186650, updated on 18-Sep-2024

    Summary

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    Official Symbol
    bath-5
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00019141
    Locus tag
    CELE_F59H6.11
    See related
    AllianceGenome:WB:WBGene00019141
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See bath-5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (2030753..2031952, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene Integrase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutation in histone deacetylase HDA-3 leads to shortened locomotor healthspan in Caenorhabditis elegans. Kawamura K, et al. Aging (Albany NY), 2020 Dec 3. PMID 33276344, Free PMC Article
    2. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_494158.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2030753..2031952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061757.4 → NP_494158.1  BTB domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494158.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N5P8
      Conserved Domains (3) summary
      smart00225
      Location:149 → 245
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:143 → 242
      BTB; BTB/POZ domain
      pfam00917
      Location:14 → 126
      MATH; MATH domain
    Nucleotide Protein
    Heading Accession and Version

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